Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq321 120 3e-22 seq252 118 9e-22 >seq321 Length=1809241 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| ||||| || || || | || || || || |||| || || ||||| | Sbjct 557357 AAAATGCAGATTTTCGTCAAGACCCTTACAGGCAAGACCATCACGCTGGACGTGGAGCCG 557298 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || | | | ||| || |||| || |||||||| |||||||| ||||||||||| || Sbjct 557297 TCGGACAGCATTGACAATGTCAAGCAGAAAATTCAGGACAAGGAAGGTATTCCACCTGAC 557238 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || ||||| ||||| ||| | || ||| || || | | || || Sbjct 557237 CAGCAGCGTCTGATTTTTGCTGGCAAGCAGCTCGAAGATGGACGTACTCTTGCGGACTAT 557178 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| ||||| || || | ||| | || ||||| |||| || ||| Sbjct 557177 AACATTCAGAAAGAGTCGACGCTTCATCTTGTATTGCGTCTGCGTGGTGGT 557127 >seq252 Length=912309 Score = 118 bits (130), Expect = 9e-22 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || ||||| ||||| || || |||| | || |||||| | | Sbjct 785740 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACGTTGGATGTGGAACCTTCT 785681 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | | ||| || |||| ||||||||||| || ||||| ||||||||||| || || Sbjct 785680 GACAGCATTGACAATGTCAAGCAAAAAATTCAGGATAAGGAAGGTATTCCACCTGACCAG 785621 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | |||||| ||| || | | || |||||| Sbjct 785620 CAGCGCTTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGATCCCTTGCAGACTACAAC 785561 Query 22399 ATTCAAAA 22406 ||||| || Sbjct 785560 ATTCAGAA 785553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419711824994530