Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq731 141 2e-29 >seq731 Length=3487 Score = 141 bits (156), Expect = 2e-29 Identities = 271/398 (68%), Gaps = 1/398 (0%) Strand=Plus/Plus Query 24093 GGCGCGGCGAGAATGCGCGGCTTCACGCCGAGCGCACCCTGCGCGGCGAGCAGCGCCTTG 24152 ||| || | |||||||||||||| ||||||||| |||||| | | |||||| || Sbjct 492 GGCACGCCAAGAATGCGCGGCTTAACGCCGAGCTGGGACTGCGCAGATAACAGCGCTTTC 551 Query 24153 ATGCCCGTGTACTTGCCGTCCGGCGTCACGGTGCCGATGACGTTCGAGGTCGTCTCGTCG 24212 |||||||| | || ||||| | |||||| |||||| | ||| ||||| || || | Sbjct 552 ATGCCCGTTTTTTTACCGTCAGCTGTCACGCCGCCGATAATGTTGGAGGTTGTTTCCGCT 611 Query 24213 GCGTCCTTGCCTTCGGCGACGCGCACGACGACGGTCAGCGGCTTCGTCTGCTTGCCGATC 24272 | | || | || |||||||| |||||||||| || || | || | | | || Sbjct 612 TCAGTTTCACCCTGAGCAACGCGCACAACGACGGTCACGGGTTTTGCTTGGTCGGCAATT 671 Query 24273 GCGTCGAGCGTGCGGCGCAGCGTGCCTTTCTTGCCGGCCTTGCCGAGCGCGGCGACGACG 24332 || || || | |||| ||||||||| || ||| | || ||| |||| | ||| Sbjct 672 GCATCCAGAGAGCGGGCCAGCGTGCCGGACTCGCCTG-TTTTCCGCTGGCGGTCAGCACG 730 Query 24333 TTCGTCAGCAGCACGGGCGTATTGAGCGGAAACGCGCTCGCGTCAGCGTCGGCCGCCGTG 24392 | || ||||| || || ||||||| || ||| || ||| || || || | | || Sbjct 731 TCGGTAAGCAGGACCGGTTTATTGAGGGGGAACACGGACGCATCTGCATCATCGCCGGTA 790 Query 24393 CAGACGACGCCGAGCACGGCCGTCGACACTGAGCGAATCGGGCGGCCGCCTTCGTTGATT 24452 ||||| | | | | ||||| |||| ||| |||||| ||| |||||||| Sbjct 791 CAGACCATACTTACAATTGCCGTGCTTACTGTTGAAATAGGGCGGGTGCCATCGTTGATC 850 Query 24453 TCGATGACGCGTACGCCGTGGTGGTAATCCTGCGGCAT 24490 || | ||| || || |||||||| |||||||| | ||| Sbjct 851 TCAACGACACGCACACCGTGGTGATAATCCTGAGCCAT 888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114245310070332