Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq653 84.2 2e-11 >seq653 Length=2021493 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/215 (69%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 94996 GGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGC---CCTCGGGTCTGTACGACTGGGAA 95052 |||||||||||||| ||| | ||||| || | | | ||||| || | || ||||| Sbjct 711779 GGCATTTTTCAGTTTGACATGTGGGGAGTCACTCCATCGTCGGGACTTTGGGATTGGGAT 711720 Query 95053 GCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATG 95112 || || | ||||| |||| ||| | || |||| || || ||||| ||| Sbjct 711719 GCACTCAAGAAAAAGGTTATGCAACATGGTTTACGGAATTCGCTACTGGTAGCCCCTATG 711660 Query 95113 CCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCC 95172 || || || || || || ||||| | |||||||| || || |||| || | || || Sbjct 711659 CCAACAGCATCTACAGCTCAGATTTTGGGCAACAATGAATCAATCGAGCCATATACTTCT 711600 Query 95173 AACGTGTACAACAGGCGGGTGCTCGCCGGGGAATT 95207 ||| |||||||| | || ||| | ||||| ||||| Sbjct 711599 AACATGTACAACCGTCGCGTGTTGGCCGGCGAATT 711565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494703646065520