Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18]
3,162 sequences; 75,321,785 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq321 86.0 4e-12
>seq321
Length=1809241
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| |||| | || || | |||||| || || ||||| || ||||| || ||
Sbjct 557128 CCACCACGCAGACGCAATACAAGATGAAGCGTCGACTCTTTCTGAATGTTATAGTCCGCA 557187
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | | ||||| | || |||||||| | |||| |||||| ||||| ||||
Sbjct 557188 AGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGA 557247
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| |||||| || ||| | || || | || || |||
Sbjct 557248 ATACCTTCCTTGTCCTGAATTTTCTGCTTGACATTGTCAATGCTGTCCGACGGCTCCACG 557307
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| | || ||||| || ||||| || || || || ||||| ||||| ||
Sbjct 557308 TCCAGCGTGATGGTCTTGCCTGTAAGGGTCTTGACGAAAATCTGCATTTT 557357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357378227229170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |