Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq252 93.3 4e-14 >seq252 Length=912309 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | ||||| || |||||||| || ||||| ||||| ||||| |||||| Sbjct 785595 TGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCTTCCTTATCCTGAATT 785654 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 ||||| |||| || | | |||| |||| || || || | || | || |||||| Sbjct 785655 TTTTGCTTGACATTGTCAATGCTGTCAGAAGGTTCCACATCCAACGTGATGGTCTTGCCG 785714 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||| || |||||||| ||||| Sbjct 785715 GTCAAAGTCTTCACAAAAATCTGCAT 785740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451985334573520