Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq428 354 6e-92 seq1361 264 9e-65 seq2577 224 7e-53 seq1640 138 9e-27 seq1204 109 4e-18 seq2047 86.0 5e-11 >seq428 Length=1405462 Score = 354 bits (392), Expect = 6e-92 Identities = 1004/1525 (66%), Gaps = 23/1525 (2%) Strand=Plus/Plus Query 517195 AGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATC 517254 ||| |||| ||| | ||| || || ||||| || || ||| |||||| || || Sbjct 1100466 AGATAATCGTCCCTTGTCATTCGTTATCGTAATCTTATTTTCTTTTCCTGTTGACTTTTC 1100525 Query 517255 AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGG 517314 |||| | |||||| | ||| ||||| |||| | ||||||||||| ||||||||||| Sbjct 1100526 CACGGCCGACACATTTAAAATTCCATTCACATCAACGTCAAATGTGACGTCAATTTGAGG 1100585 Query 517315 GACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATC 517374 || || | | | ||| || || || |||| | | ||| | ||||| || ||| || Sbjct 1100586 CACACCGCGCGGCATAGGCGGAATACCATCCAGACTGAATTTGCCCAGTAAATGATTGTC 1100645 Query 517375 TTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGA 517434 || | | ||||| || || || | ||| || || ||| || ||||| | Sbjct 1100646 ACGTGTCATAGTCCGTTCGCCTTCAAACACTTGAATCAACACGCCAGACTGGTTATCAGT 1100705 Query 517435 ATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATAT 517493 ||| |||| || | || || || || || | ||| ||||| | | ||| | | Sbjct 1100706 ATATGTTGAGAACGAT-TGCATCTTCTTTGCCGGGACTGTCGTGTTGCGAGGAATGAGCT 1100764 Query 517494 TGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGA 517553 ||||||||| ||||| || ||||||| |||||||| | ||| | || || | ||| | Sbjct 1100765 TGGTCATAACTCCACCAGCAGTTTCTAGTCCAAGAGACAAAGGCGCCACGTCTAATAGCA 1100824 Query 517554 CAATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAG 517610 || | ||| | ||| || || | || || | ||| || || || | | || Sbjct 1100825 AAAGGTCTTGCAATTTCGCAGAAGACTCACTTCCACTTAAAATTGCCGCCTGCACTGTAG 1100884 Query 517611 CACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAA 517670 ||||||| || ||||| ||||| || || | | || | || | || || || |||| Sbjct 1100885 CACCATACGCTACAGCCTCATCTGGGTTGATCGATTTAAACAGATCCTTGCCGTTAAAAA 1100944 Query 517671 AATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTT 517730 | | || | ||| ||||| ||||| || | ||| ||||| || | ||||||| Sbjct 1100945 AGTCCATCAGCATTTGCTGCACCTTTGGAATTCGCGTTGAACCTCCTACAAGAACAATTT 1101004 Query 517731 CATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 517790 ||| |||||| ||| ||| || ||||| || |||| | ||||| || | Sbjct 1101005 CATTCACCTGACTTTTGGACAGCTTGGAATCTCGTAGTACTTGAGCCACGGGATCCATGG 1101064 Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850 | | ||| | || | |||||| ||||| || |||| |||| || ||| Sbjct 1101065 TCTTCCGAAAGTACTCAGCACAAAGATCTTCAAAACGCGCTCGTGTAATGGTCGAGTTAA 1101124 Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGT 517909 |||| || || || || || ||||||| ||| | ||| | || | || | ||| | Sbjct 1101125 AATCGATGCCGTCAAATAACGAATCAATTTCGAG-GTACGCCTGGGCTGACGTAGACAAC 1101183 Query 517910 GCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT- 517968 | || || || || || ||||| || | || | ||||| || | ||||||| Sbjct 1101184 GTCCGCTTTGCGCGCTCGCATGCCGTACGAAGACGACGTAAAGCACGT--TGATTGACCG 1101241 Query 517969 -CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTAT 518027 |||||| || || ||| | ||| || || ||||| | | || | ||||| | Sbjct 1101242 ACAAATCCTTTCGATGTTTGCGCTTAAATTCCGCAACAAAATACTCAACTAATCGATTGT 1101301 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087 |||||||||| ||||| || | || | || | || || | |||| || | || | Sbjct 1101302 CAAAATCTTCTCCTCCTAAGTGGGTGTCACCGGCAGTTGCCATGACTTCAAAGATACCTT 1101361 Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 |||||| || |||||| | || ||| |||||||| || | ||||||||| | |||| Sbjct 1101362 CTTCAATAGTCAAAAGTGAAACGTCAAACGTTCCACCTCCGAGATCAAAAATCAACACAT 1101421 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 || | || || || || || |||||||| | || |||||||||||||||| Sbjct 1101422 GGTGCTC---GCCTCCTTTCTTGTCCAGTCCATACGCGATTGCCGCAGCAGTTGGTTCAT 1101478 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 | ||||||| | ||||| | |||||||||| || |||||||| || || || | || Sbjct 1101479 TGATAATTCGAAGCACATTCAAACCAGCAATTGCACCCGCATCTTTGGTTGCCTGACGTT 1101538 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | ||||| ||||||||||| ||||| || | ||| |||| | |||| |||||| ||| Sbjct 1101539 GCGAATCATTAAAATATGCTGGAACCGTCACAACTGCATTTCTCACTTGTTTACCGATAA 1101598 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-GGAA 518386 | || || | | ||| ||| | | | ||| |||||||| | || || ||| Sbjct 1101599 ATGCTTCGGCAATCTCACGCATCTTAATGAGCACCATCGATGAAATCTCCTCAGGCTGAA 1101658 Query 518387 TATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATT---ACCAACATT 518442 | | || ||||| ||||| || || | | | || || || | | || Sbjct 1101659 AAGT-TTTTGATTCGCCTTTGA-ATTGCACCACCACTTGAGGCTTGTTTTCAGGACCACA 1101716 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTC 518501 || ||||| || ||||||| || ||||| ||||| || || | || ||| | | Sbjct 1101717 AACGACTTTGAACGGCCAGTGCTTGATATCCGATTGTAC-CTCGGAATCGGCAAACTTGC 1101775 Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATT 518561 |||||| || ||||| | || || | || ||| || ||| ||||| | |||| | Sbjct 1101776 GACCAATCAACCGTTTGACGTCGAATACCGTGTTGTGTGCATTCATTGCCACCTGATTCT 1101835 Query 518562 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621 |||| ||||||||||| ||| |||| || || ||||||| || ||||| ||||| || | Sbjct 1101836 TGGCAGCATCTCCAATTAGACGTTCAGTATCGGTAAATGCTACGTATGACGGAGTGGTAC 1101895 Query 518622 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 518681 |||| || || || || || || || || ||| | |||||||| ||||| || || Sbjct 1101896 GATTGCCCTGGTCGTTAGCTATGATCTCCACTCGGTCGTTTTGCCACACACCCACGCACG 1101955 Query 518682 TAAAAGTTGTTCCTAAATCAATACC 518706 | || || || ||||| ||||| Sbjct 1101956 AGTACGTCGTACCCAAATCGATACC 1101980 >seq1361 Length=1591 Score = 264 bits (292), Expect = 9e-65 Identities = 806/1227 (66%), Gaps = 29/1227 (2%) Strand=Plus/Minus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | |||||| ||||| || | || || || || || || || || | || | | Sbjct 1588 GTCATGACACCACCAGCTGTCTCGAGTCCCAGTGAGAGTGGTGTCACGTCGAGCAGAAGA 1529 Query 517556 ATATTTTGAAGTTTTTCATC--AGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCA 517612 | || ||| ||||||||| ||| | |||| | ||| || || || | | |||| Sbjct 1528 AGATCTTGCAGTTTTTCAGACGAGTCGTTACCACTCAAAATCGCAGCCTGCACTGTAGCA 1469 Query 517613 CCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAA 517672 ||||| |||||||| || || || || | | | ||| | | ||| || || || || Sbjct 1468 CCATAGGCAACAGCCTCGTCGGGGTTGATCGACTTGTTTGGCTCTTTGCCGTTAAAGAAG 1409 Query 517673 TTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 517732 | || | ||||| ||||| |||||||||| || || || || | || | ||| Sbjct 1408 TCGGACAACAGTTGCTGCACCTTGGGAATACGAGTCGACCCACCCACAAGCACCACTTCG 1349 Query 517733 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCC 517792 || ||||| |||| || || | || | ||||| || || || || | | Sbjct 1348 TGTACCTGACTTTTAGAAAGCTTCGCGTCACGCAGCACTTTCTCCACAGGCTCCAT---C 1292 Query 517793 GCTCTA---AACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTA 517849 | | | || ||||| ||| | ||||| || ||| | ||||| || || Sbjct 1291 GTTTTGCGGAAATAGTCTCCACACATGTCTTCAAAACGAGCACGAGTAATGGTCGAGTTG 1232 Query 517850 TAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAG 517908 | || || || ||||| | ||||||| ||| || ||| | ||||| || ||||| | Sbjct 1231 AAGTCGATACCGTCGAAAAGCGAATCAATTTCGAT-GTATGCTTGAGCTGACGAAGACAA 1173 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT 517968 | ||| |||||||| ||||| ||||| | || | || | || | ||||| | Sbjct 1172 CGTACGCTTAGCACGCTCACACGCTGTACGCAGACGACGGAGAGCACGT--TGATTCTGT 1115 Query 517969 CAAATCTGTTTTATATT-TTCTCTTGAAAT-CTTCAACACACCATGTT--ACAAGACGAT 518024 | | | || || ||| || |||| ||| || | ||| | |||||||| | Sbjct 1114 GACAGGTCCTTGCGATGCTTCCGTTTAAATTCTTGGACGAA--ATGATCGACAAGACGGT 1057 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 | ||||| || || || ||||| | |||| || | ||| ||| | || | ||| | | Sbjct 1056 TGTCAAAGTCCTCGCCGCCCAAATGCGTATCACCCGCCGTGGCTTTGACCTCGAAGATAC 997 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || || | ||| || | |||||| |||||||||||| | ||||| || | | Sbjct 996 CTTCCTCGATGCTCAACAGCGACACATCAAAGGTTCCACCACCGAGGTCAAAGATCAACA 937 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 | || ||| | | || ||||| ||||| ||||||| |||||||| || || | Sbjct 936 CGTTGCGTTCACCGCC---CTTCTTATCCAGACCGTACGCAATCGCAGCAGCTGTCGGCT 880 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 | ||||| || | || || || || |||||||| || ||||| || || ||||| | Sbjct 879 CGTTAATTATACGCAGCACGTTGAGGCCAGCAATCGCACCGGCATCCTTTGTTGCTTGAC 820 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 ||| || || ||||| || || ||||| ||||| ||||||| | || ||||| |||| Sbjct 819 GTTGCGAGTCATTAAAGTAAGCTGGAACCGTAATGACGGCATTTTTCACCTCTTTGCCAA 760 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 | ||||| ||| | ||||||| | | | ||| |||||||| | || || Sbjct 759 TGTAAGCCTCAGCCACCTCACGCATTTTAATCAGCACCATAGATGAAATCTCCTCGGGCT 700 Query 518385 AATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACC---AACA 518440 | || ||| | || |||| ||| ||| || | || |||| ||| | || Sbjct 699 GAAATGTCTTTGTCTCGCCCTTGAATTGA-ACTGTAATCTGAGGCTTATCACCAGGACCA 641 Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 | || || |||||||||| || ||||| | | || |||| | || || | Sbjct 640 GCTGTCACCTTGAATGGCCAGTGCTTGATATCGGCCTTTACGACGGGGTC-TGAATATTT 582 Query 518501 -CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATA 518559 | |||||| | ||||| || ||||| | || |||| | ||| |||||| | |||| Sbjct 581 GCGACCAATAAGGCGTTTGGCGTCAAACACCGTGTTGGACGAATTCATTGCAACCTGATT 522 Query 518560 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 518619 ||||| || || ||||| || | |||| ||||| |||| |||||| |||||||| || Sbjct 521 CTTGGCGGCGTCACCAATAAGGCGCTCTGAGTCTGTGAATGCAACATACGATGGAGTAGT 462 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 ||| || ||||| || || ||||| || || || |||| ||||||||||||||||| Sbjct 461 GCGGTTGCCTTGGTCGTTAGCAATGATCTCGACGCGGTCATTCTGCCATACACCTACACA 402 Query 518680 ACTAAAAGTTGTTCCTAAATCAATACC 518706 | |||| || || | ||| || || Sbjct 401 CGAATAAGTCGTGCCAAGATCGATGCC 375 >seq2577 Length=255817 Score = 224 bits (248), Expect = 7e-53 Identities = 863/1339 (64%), Gaps = 35/1339 (3%) Strand=Plus/Minus Query 517387 TCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAA 517446 ||||||||| ||||| | || || ||| | | || || || | ||| || | || Sbjct 217627 TCGTTCACCTTCGAAGACCTGAATCAGAACACCCGGCTGGTTGTCGGCATACGTCGAGAA 217568 Query 517447 TACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATAC 517505 | |||| || |||||| |||| ||| ||||| | | |||| | | ||||| | || Sbjct 217567 TG-TCTGCGACTTTTTAGTGGGAACTGTCGTGTTACGAGCAATCAGTGTCGTCATGACAC 217509 Query 517506 CACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAA 517565 |||| ||||| || | || || || || || || || || | || | || || ||| | Sbjct 217508 CACCAGCTGTCTCGAGTCCCAGTGAGAGTGGTGTCACGTCGAGCAGAAGAAGATCTTGCA 217449 Query 517566 GTTTTTCATC--AGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 |||||||| ||| | |||| | ||| || || || | | ||||||||| |||| Sbjct 217448 GTTTTTCAGACGAGTCGTTACCACTCAAAATCGCAGCCTGCACTGTAGCACCATAGGCAA 217389 Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 517682 |||| || || || || | | | ||| | | ||| || || || || | || | | Sbjct 217388 CAGCCTCGTCGGGGTTGATCGACTTGTTTGGCTCTTTGCCGTTAAAGAAGTCGGACAACA 217329 Query 517683 GTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG 517742 |||| ||||| |||||||||| || || || || | || | ||| || ||||| Sbjct 217328 GTTGCTGCACCTTGGGAATACGAGTCGACCCACCCACAAGCACCACTTCGTGTACCTGAC 217269 Query 517743 ATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTA---A 517799 |||| || || | || | ||||| || || || || | || | | | Sbjct 217268 TTTTAGAAAGCTTCGCGTCACGCAGCACTTTCTCCACAGGCTCCAT---CGTTTTGCGGA 217212 Query 517800 ACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTC 517859 | ||||| ||| | ||||| || ||| | ||||| || || | || || | Sbjct 217211 AATAGTCTCCACACATGTCTTCAAAACGAGCACGAGTAATGGTCGAGTTGAAGTCGATAC 217152 Query 517860 CTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGTGCACGTTTA 517918 | ||||| | ||||||| ||| || ||| | ||||| || ||||| | | ||| ||| Sbjct 217151 CGTCGAAAAGCGAATCAATTTCGAT-GTATGCTTGAGCTGACGAAGACAACGTACGCTTA 217093 Query 517919 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTT 517978 ||||| ||||| || || | | | || | ||| |||| || || | | Sbjct 217092 GCACGCTCACACGCAGTACGCAAACGACGCAGGGCAC--GCTGGTTCTCCGTGATGTCCT 217035 Query 517979 TTATAT--TTTCTCTTGAAATCTTCAACACACCATGT----TACAAGACGATTATCAAAA 518032 | | || | ||||| || | | | || |||||||||||| ||||| Sbjct 217034 TGCGGTGCTTACGTTTGAACTCCTG----CGTGAAGTGGTCTACAAGACGATTGTCAAAG 216979 Query 518033 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 518092 || ||||| || | | || | || | ||||| | |||| || | || || ||| Sbjct 216978 TCCTCACCACCAAGGTGGGTGTCACCAGCAGTAGCCTTCACTTCAAAGATACCTTCCTCA 216919 Query 518093 AGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 518152 | ||| || | ||||| ||| || ||||| | |||||| || | ||||| | Sbjct 216918 ATGCTCAACAGCGAAACATCGAAGGTACCTCCACCAAGATCAAAGATCAACACATTGCGT 216859 Query 518153 TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 518212 || | | | || | |||| || || |||| ||||||||| || || || || ||| Sbjct 216858 TCACCGCCCTTCTTGTC--CAAG-CCGTATGCAATAGCAGCAGCCGTAGGCTCGTTGATA 216802 Query 518213 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 518272 || | | || ||||||||||||||| || || || ||||| ||||| | || || Sbjct 216801 ATACGAAGTACGTTAAGACCAGCAATTGCACCAGCGTCCTTAGTTGCTTGACGCTGCGAG 216742 Query 518273 TCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCG 518332 ||||| || || |||||||| || ||||| |||| ||||||| || |||||| | || Sbjct 216741 TCGTTGAAGTAGGCAGGAACCGTGATAACAGCATTTTTTACTTCCTTGCCAATAAATGCT 216682 Query 518333 CTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--GGAATATT 518390 || | |||||| | || | ||| || ||||||| ||| || |||| || Sbjct 216681 TCAGCTACCTCACGCATTTTGATCAACACCATGGACGAAATTTCTTCAGGCTGGAAGGTT 216622 Query 518391 GCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA---ACATTAATAA 518447 || ||||| | | | ||| | | | ||||| | |||| || | | Sbjct 216621 --TTCGATTCGCCCTTAAACTGTACAACGATCTGCGGTTTGTCACCAGCGCCAGATGTCA 216564 Query 518448 CTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAA 518507 | || |||||||||| || ||||| | |||||| |||| ||| | | ||||| Sbjct 216563 CCTTGAATGGCCAGTGCTTGATATCAGCCTGAACAAGCGGGTCCGAAAATTTGCGACCAA 216504 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 | || || || ||||| || | || ||| | || || || |||| | || || | Sbjct 216503 TCAAACGCTTAGCATCGAACACGGTGTTGTGCGCGTTCATGGCCACTTGGTTCTTAGCCG 216444 Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 |||| ||||||||| | || || || || || | || ||||| ||||| || || |||| Sbjct 216443 CATCACCAATCAGACGCTCGGTGTCGGTGAAAGCCACGTATGACGGAGTAGTACGGTTAC 216384 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 | || ||||| ||||| ||||| || | |||||||| ||||| ||||| | | Sbjct 216383 CCTGGTCATTGGCAATGATTTCTACACGGTCGTTTTGCCACACACCGACACAGGAGTACG 216324 Query 518688 TTGTTCCTAAATCAATACC 518706 | || || | ||||||||| Sbjct 216323 TCGTACCAAGATCAATACC 216305 >seq1640 Length=1372582 Score = 138 bits (152), Expect = 9e-27 Identities = 732/1154 (63%), Gaps = 39/1154 (3%) Strand=Plus/Minus Query 517583 CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACA 517642 ||| | | ||| || |||| | ||||||||||||||||||||||||||| ||||| | Sbjct 1115087 CCATCCAAAATCGCACCTTGCACAGCAGCACCATATGCAACAGCTTCATCGGGATTGATC 1115028 Query 517643 GTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAAT 517701 | | | | | ||||||| || | | ||||| | | |||| ||||| ||||| Sbjct 1115027 GACTTAGACAACTCTTTACCACCAAAGAGAGAAGAAAGCA-TCGTCTGGACCTTGGGAAT 1114969 Query 517702 ACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATC 517761 ||| | || ||||| || | || | |||| ||| | | | | || ||| | ||| Sbjct 1114968 ACGCGTCGAACCTCCCACCAGAACCAATTCAGTCACGTCTTCTGGCTTCATTTTGGCATC 1114909 Query 517762 CAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTC 517821 ||| ||||| ||| | || || | | ||||| ||| | | ||| Sbjct 1114908 TTCTAACACTTTCAAAACCGTCTCTTCACATCGTTTGAACAACTCTTCATTTAACGATTC 1114849 Query 517822 GAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTT 517880 || || || | |||| ||| | | | || |||| ||||| || | |||||||| | Sbjct 1114848 AAACTTGGCACGGGTAACAGT-AGACGAAAAGTCAACGCCTTCAAAAAGCGAATCAACCT 1114790 Query 517881 CAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTA 517940 | | || || | || | ||| ||||| || ||||| ||||| || |||| | Sbjct 1114789 CGACCGAAGCTGACGTTGTAGATGATAGCATTCGCTTAGCCGACTCACAGGCAGTCCGAA 1114730 Query 517941 GTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTT---ATATTTTCTCTTGAAAT 517997 | | || | || ||||| | | ||| | || || ||| | |||||| | Sbjct 1114729 GACGACGCATAGCACGAGCTGAAGTAGACGGATCCATGTTGCGATTTTTGCGCTTGAACT 1114670 Query 517998 CTTCAACACACCATGTTACAAGACGAT--TATCAAAATCTTCACCTCCCAATTTAGTATT 518055 | | | | | || | | | | | ||||||| |||||||| ||||| | ||| | Sbjct 1114669 C--CGAAAGAAGATACTCAACCATGTTGTTATCAAAGTCTTCACCACCCAAATGAGTGTC 1114612 Query 518056 TCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATG 518115 || || | | | |||| |||| |||| |||| || | || | ||||||| Sbjct 1114611 ACCACCTGTCGATTTGACTTCAAAAATGCCATTCTCAATCGATAGAATCGATACATCAAA 1114552 Query 518116 GGTTCCACCACCCATATCAAAAATAAGTACATT-----CATT----TCTTTGTCTTGGTT 518166 ||| |||||||| | || || || | || || | || || || || || Sbjct 1114551 GGTACCACCACCTAAGTCGAATATCAAAACGTTGCACGCCTTGCCGTCCGTGCCTGCATT 1114492 Query 518167 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 518226 | | || || |||||||| |||||||| || || |||||||| ||||| | | || | Sbjct 1114491 TGTGTCGAGTCCATACGCCAAAGCAGCCGCTGTAGGTTCATTGATAATACGCTTCACGTC 1114432 Query 518227 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 ||| || || ||| || ||||| || || | |||| || || ||||| ||||| Sbjct 1114431 AAGTCCGGCGATTGAACCGGCATCCTTGGTCGACTGTCGCTGCTGGTCATTAAAGTATGC 1114372 Query 518287 AGGAACAGTAATAACGGCATCAGTTACTTCTTTA---CCAATATAAGCGCTT--GCCGTT 518341 || || || | ||| || | || | | ||| |||| || ||||| ||||| Sbjct 1114371 GGGGACGGTCACAACAGCTT--GTGAAATATTTTGGCCCAA---AAACGCTTCAGCCGTC 1114317 Query 518342 TGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCA 518401 | |||||| || | ||| |||||||||| |||||| | | ||| ||| Sbjct 1114316 TCCTTCATTCGCAGCAATACCATAGATGAAATTTCTTCTGGTGTGAAGCTCTTTTTCTCA 1114257 Query 518402 TTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTA-----AATG 518456 || | | ||||||| | ||||| | | | | | ||| | || | Sbjct 1114256 CCTTTAAAGTCCACTTCAATCAACACTTTATCATCGTC--TCCTTCCTTGATCGTGAAGG 1114199 Query 518457 GCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTT 518516 | ||| || |||| || || | ||| | ||| | ||||| | |||| Sbjct 1114198 GAAAGTGCGTCGCATCTTTTTTCACGACCTCGTCGCTGAAACTGCGGCCAATGATACGTT 1114139 Query 518517 TTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTG-ATATTTGGCTGCATCTCCA 518575 | |||||||| || || || || | |||| | |||||||| || |||| | || || ||| Sbjct 1114138 TGGCATCAAAGATCGTGTTCGTGGCATTACTCGCAGCTTGGATCTTTG-CAGCTTCACCA 1114080 Query 518576 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 518635 |||||| |||| |||| |||| | ||| |||||||||| || ||||| |||| | Sbjct 1114079 ATCAGACGTTCACTCTCATTAAAAGCAACCCATGATGGAGTAGTACGATTTCCTTCACTG 1114020 Query 518636 TTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCT 518695 || || || || || |||| ||| | | ||| ||||| ||||| |||| || || Sbjct 1114019 TTTGCGATGATCTCGACTTGACCGTCCTTCCAGACACCCACACATGAGTAAGTCGTACCC 1113960 Query 518696 AAATCAATACCAAT 518709 |||||||||||||| Sbjct 1113959 AAATCAATACCAAT 1113946 >seq1204 Length=1808626 Score = 109 bits (120), Expect = 4e-18 Identities = 206/300 (69%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| | |||||| |||||||| ||||| | ||||| || || || || | || Sbjct 793820 ACGCTGATCAAAGTCTTCACCGCCCAAGTGAGTATCACCGTTAGTGGCAAGCACCTCAAA 793761 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | || | || | | || |||||| |||||| || |||||||||| |||||| | Sbjct 793760 CACACCGCCATCGATTGCCAGAAGAGTAACATCAAAAGTACCACCACCCAAATCAAACAC 793701 Query 518140 AAGTACATTCATTTCTTTGTCTTGG---TTTTTATCAAGACCATACGCAAAAGCAGCAGC 518196 | || || ||||| | |||| || || |||| ||| || |||| |||||||| Sbjct 793700 TAAAACGTT--TTTCTC-GCCTTGCGCCTTCTTGTCAATACCGTAAGCAATGGCAGCAGC 793644 Query 518197 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 518256 || || || |||||||| | | ||| | |||||||| || | || || |||||||| Sbjct 793643 TGTAGGCTCGTTAATAATACGCTGAACCGTGAGACCAGCGATCGTACCAGCGTCTTTAGT 793584 Query 518257 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTC 518316 ||| || | ||| | ||| ||||| || ||||| || || | || || ||| ||||| Sbjct 793583 GGCCTGGCGTTGGGCATCATTAAAGTAGGCAGGCACTGTCACCACAGCGTCAAACACTTC 793524 >seq2047 Length=2271937 Score = 86.0 bits (94), Expect = 5e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 870797 ATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGA 870856 ||| | || || | ||| |||||||| | ||| || || |||||| | || || || | Sbjct 1917515 ATTGTCGTTGACTTTTCGTCTCCAAACACTGCCAAGGACATGCATGTGGGTCACTTGCGT 1917456 Query 870857 TCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTAT 870916 || || ||||| ||||| | || | | | | | ||| | || |||||||| | Sbjct 1917455 TCCACAATTATCGGTGATACAATGTCTCGCATTCTTGAATTCCAGGGTCACGATGTGAAG 1917396 Query 870917 CGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAAT 870963 ||||| |||||| | ||||||||||| |||||||| || ||||| || Sbjct 1917395 CGTATCAATCATATTGGTGATTGGGGCACTCAATTTGGAATGTTGAT 1917349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780665491144372