Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq731 114 3e-21 >seq731 Length=3487 Score = 114 bits (126), Expect = 3e-21 Identities = 263/398 (66%), Gaps = 1/398 (0%) Strand=Plus/Plus Query 14878 GGCGCGACCAGGATGCGCGGCTTCACGGCGAGCTTCCCCTGCGCGGCCAGCAACGCCTTC 14937 ||| || | || ||||||||||| ||| |||||| |||||| | | || ||| ||| Sbjct 492 GGCACGCCAAGAATGCGCGGCTTAACGCCGAGCTGGGACTGCGCAGATAACAGCGCTTTC 551 Query 14938 ATGCCGGTGTATTTGCCGTCCGGCGTGACGGTGCCGATGACGTTCGCGGTCGTCTCGGCT 14997 ||||| || | ||| ||||| | || ||| |||||| | ||| | ||| || || ||| Sbjct 552 ATGCCCGTTTTTTTACCGTCAGCTGTCACGCCGCCGATAATGTTGGAGGTTGTTTCCGCT 611 Query 14998 TCGTCCTTTCCTTCCGCGACGCGCACGACGACGGTGACGGGCTTCGTCTGCTTGCCGATC 15057 || | || | || |||||||| |||||||| ||||| || | || | | | || Sbjct 612 TCAGTTTCACCCTGAGCAACGCGCACAACGACGGTCACGGGTTTTGCTTGGTCGGCAATT 671 Query 15058 GCGTCGAGCGTGCGGCGCAGCGTGCCCTTCGTGCCGGCCTTGCCAAGCGCCGCGATGACG 15117 || || || | |||| ||||||||| | ||| | || || || | | ||| Sbjct 672 GCATCCAGAGAGCGGGCCAGCGTGCCGGACTCGCCTG-TTTTCCGCTGGCGGTCAGCACG 730 Query 15118 TTCGTCAGCAGCACCGGCGTGTCGAGCGGGAACGTCGCCGGGTCGGCGNNNNNNNNNNTG 15177 | || ||||| ||||| | | ||| |||||| | || || || | Sbjct 731 TCGGTAAGCAGGACCGGTTTATTGAGGGGGAACACGGACGCATCTGCATCATCGCCGGTA 790 Query 15178 CAGACGATGCCGAGCACGGCCGTGGAGACCGTGCGAATCGGCCGGCCGCCTTCGTTGATT 15237 ||||| || | | | |||||| || || ||| || ||| ||| |||||||| Sbjct 791 CAGACCATACTTACAATTGCCGTGCTTACTGTTGAAATAGGGCGGGTGCCATCGTTGATC 850 Query 15238 TCGATGACGCGTACGCCGTGGTGGTAATCCTGCGGCAT 15275 || | ||| || || |||||||| |||||||| | ||| Sbjct 851 TCAACGACACGCACACCGTGGTGATAATCCTGAGCCAT 888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129649531639348