Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_019545.1 Length=47355 Score E Sequences producing significant alignments: (Bits) Value seq1398 289 9e-74 >seq1398 Length=5533 Score = 289 bits (320), Expect = 9e-74 Identities = 379/523 (72%), Gaps = 4/523 (1%) Strand=Plus/Plus Query 36804 TGCACGTTCGCCAATTACGAAGTTAACGGTGATGGCCAGCGTAAGGCTTTCACGATGGCT 36863 |||| ||||| ||||||| || | || || |||||||| | || | | ||||| Sbjct 1 TGCAGCTTCGCAAATTACGCGGTGGAGGGCGACGGCCAGCGCCATGCGCTGAGTATGGCC 60 Query 36864 AAGAGCTATGCGCAGAACTTTGGCGCCGGATTTGCGAGCTTTGTGTTCAGCGGTGGTCCG 36923 |||||||| ||||| || |||||| |||| ||||| || || || |||| || || Sbjct 61 AAGAGCTACGCGCAAAATTTTGGCACCGGCTTTGCCAGTTTCGTTTTCACTGGAAAGCCC 120 Query 36924 GGAACCGGGAAAAACCATCTTGCGGCGGCAATCGGAAATCATCTGCTG--GCCGGCGGTC 36981 || || ||||||||||| || | ||||| ||||||||| |||||||| || || | | Sbjct 121 GGCACGGGGAAAAACCACCTCTCAGCGGCCATCGGAAATTATCTGCTGAAGCAGGGG--C 178 Query 36982 ATAGTGTTCTGGTGGTAACCATTCCTGACCTGATGCTCAGGGTTCGTGAGTGCTACGACG 37041 | || ||| | || || | || || || | || | | || | |||||||||| Sbjct 179 GAACGGTCCTGATTGTGACAGTGCCGGATCTTACTCTGCGCGCCCGGGCTTGCTACGACG 238 Query 37042 GTGGGCAATCAGAAGCGTCCCTGCTTGATGACCTTTGCAAAGTTGACCTGCTGGTACTGG 37101 ||||| || ||| | | ||||| |||||||| |||||||| || |||||||| || | Sbjct 239 AAGGGCAGTCCGAATCTGCGCTGCTGGATGACCTCTGCAAAGTGGATCTGCTGGTGCTCG 298 Query 37102 ATGAAGTCGGTATTCAGCGTGGGAGCAGTGGTGAGAAGGTCATTCTCAATCAGGTTATCG 37161 |||||||||| |||||||| | ||| | || ||||| || | | || ||| |||| | Sbjct 299 ATGAAGTCGGCATTCAGCGCGAAAGCCGCGGCGAGAAAGTTTTGTTGAACCAGATTATTG 358 Query 37162 ATCGCCGTCTCTCATCGATGCGACCTGTTGGCGTTCTGACGAATCTTAACCACGAGGGGC 37221 ||||||| || | | ||||| || |||||||||||||| || || || | || | | Sbjct 359 ATCGCCGCCTGGCCGCAATGCGCCCGGTTGGCGTTCTGACCAACCTGAATTATGACGCAC 418 Query 37222 TGTTGGATTCACTGGGCGCGAGGGTTATCGATCGCCTCCAGATGGACGGAGGGATGTGGG 37281 || | || | | |||||||| |||||||||||||| | ||||| || || |||| Sbjct 419 TGGTTGAGACCGTTGGCGCGAGAGTTATCGATCGCCTGCGCATGGATAACGGAATTTGGG 478 Query 37282 TGAATTTTGACTGGGGAAGCTACCGGAAAAACGTTAGCCACCT 37324 ||||||||||||||| ||||| || |||||| |||||||| Sbjct 479 TGAATTTTGACTGGGAGAGCTATCGCGGAAACGTCAGCCACCT 521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151408714578548