Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq731 264 2e-66 >seq731 Length=3487 Score = 264 bits (292), Expect = 2e-66 Identities = 298/393 (76%), Gaps = 7/393 (2%) Strand=Plus/Plus Query 26585 CGGCACGCCGAGAATGCGCGGTTTGACGCCGAGCTGCGTCTGCGCGCTCAGCAGCGCCTT 26644 ||||||||| ||||||||||| || ||||||||||| | |||||| | |||||| || Sbjct 491 CGGCACGCCAAGAATGCGCGGCTTAACGCCGAGCTGGGACTGCGCAGATAACAGCGCTTT 550 Query 26645 CATGCCGGTGTA---ACGGCCATTCTCGTCGGTGGTGCCGATAATGTTCGAGGTGGTTTC 26701 |||||| || | || | || || ||| | |||||||||||| ||||| ||||| Sbjct 551 CATGCCCGTTTTTTTACCGTCAG-CT-GTCAC-GCCGCCGATAATGTTGGAGGTTGTTTC 607 Query 26702 CGCCGGGGTGGCACCTTCCGCCACGCGCACCACGACGGTGACGGGTTTGGCCTGGTCAGC 26761 ||| || |||| | || |||||||| |||||||| |||||||| || ||||| || Sbjct 608 CGCTTCAGTTTCACCCTGAGCAACGCGCACAACGACGGTCACGGGTTTTGCTTGGTCGGC 667 Query 26762 GATCGCCTGCAGCGCGGCGGCCAGCGTGCCTTTTTTACCGGCTTTGCCAATGGCCGACAG 26821 || || | ||| | | |||||||||||| | || | ||| || |||| | ||| Sbjct 668 AATTGCATCCAGAGAGCGGGCCAGCGTGCCGGACTCGCCTGTTTT-CCGCTGGCGGTCAG 726 Query 26822 CACGTTGGTCAGCAGCACCGGCTCATTGAGCGGGAAGGCGGCCGCATCGGCATCGTCTGC 26881 ||||| ||| ||||| ||||| | |||||| ||||| ||| |||||| ||||| || | Sbjct 727 CACGTCGGTAAGCAGGACCGGTTTATTGAGGGGGAACACGGACGCATCTGCATCATCGCC 786 Query 26882 GGTACAGACCATGCCGACAATGGCCGTGGATACGGTGGAAATGGTGCGCGTGCCGTCGTT 26941 |||||||||||| | ||||| |||||| ||| || ||||| | ||| ||||| ||||| Sbjct 787 GGTACAGACCATACTTACAATTGCCGTGCTTACTGTTGAAATAGGGCGGGTGCCATCGTT 846 Query 26942 GATTTCGACGACGCGGACACCGTGATGATAATC 26974 ||| || ||||| || |||||||| |||||||| Sbjct 847 GATCTCAACGACACGCACACCGTGGTGATAATC 879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94479652273944