Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq610 196 3e-44 seq428 188 5e-42 seq2577 178 8e-39 seq1361 149 4e-30 seq1204 140 2e-27 seq321 116 2e-20 seq1640 107 1e-17 seq2047 87.8 1e-11 >seq610 Length=3420761 Score = 196 bits (216), Expect = 3e-44 Identities = 323/463 (70%), Gaps = 11/463 (2%) Strand=Plus/Plus Query 297112 GATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTTGGAAATCTGAT 297171 |||||| |||||| | || | | |||||| || || ||||| | ||| | |||| Sbjct 714745 GATTGGAATATTTCTCGTGGTCGTTTTTGGGGTACTCCTCTTCCATTATGGGTAAGTGAT 714804 Query 297172 GATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAATTTTCAGGAATT 297231 ||| ||||||| | ||||| | || || | | |||| | || | || |||| | Sbjct 714805 GATTATGAAGAAGTTGTTTGTGTGGGATCGATAGCAGAACTTGAAACACTTACAGG---T 714861 Query 297232 GATAATATTAATGATTTACATATTGATAAAATTGATCAAATAAAAATTCCTTCTCGTAAA 297291 || || | | ||||||||| ||| |||||||| ||| |||||| || ||| Sbjct 714862 GAAAAAGTAACAGATTTACATCGTGAGTTTATTGATCATTTAACAATTCCATCAAAAAAA 714921 Query 297292 GGAAAAGGCATGTTATCTCGTGTTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCT 297351 |||||||| || ||| ||| ||| | | ||||| ||||||||||||||| ||||| Sbjct 714922 GGAAAAGGAATATTACATCGAGTTCCAGAAGTTTTTGATTGTTGGTTTGAAAGTGGTTCA 714981 Query 297352 ATGCCTTATGGTCAAATTCATTATCCTTTTGAAAATTCCGAAATTTTAGACACTTCACAA 297411 ||||| |||| ||| |||||||| ||||||||| |||| || | || | || Sbjct 714982 ATGCCATATGCACAACAACATTATCCGTTTGAAAAT----CAATT---GAAATTTGAAAA 715034 Query 297412 GA-TTATATTGCAGATTTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATAC 297470 || | | || |||||| || ||||| | ||||||||||| | || ||||||||||| Sbjct 715035 GACCTTTCCAGCTGATTTTGTAGCAGAAGGACTTGATCAAACACGTGGATGGTTTTATAC 715094 Query 297471 TTTATTAGTTCTTTCTACAGCTATATTTAACAAACCAGCATTTAAAAATGTAATTGTTAC 297530 |||| | ||| | ||||| || | ||| | |||||||||||| ||||| | ||||| | Sbjct 715095 TTTAATGGTTTTATCTACTGCACTTTTTGATAAACCAGCATTTCAAAATCTTATTGTCAA 715154 Query 297531 AGGAATTGTTAACGCAGCTGATGGACAAAAAATGTCAAAAAGT 297573 || |||| || | ||||| | ||| ||| |||||| Sbjct 715155 TGGTCTTGTACTTGCTGAAGATGGTCGAAAGATGAGTAAAAGT 715197 >seq428 Length=1405462 Score = 188 bits (208), Expect = 5e-42 Identities = 374/549 (68%), Gaps = 11/549 (2%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||| ||||| || || || ||| || || | ||| |||||||| | ||| || Sbjct 1101980 GGTATCGATTTGGGTACGACGTACTCGTGCGTGGGTGTGTGGCAAAACGACCGAGTGGAG 1101921 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || || || || ||||| || ||| | || || || ||||| || | ||||| || ||| Sbjct 1101920 ATCATAGCTAACGACCAGGGCAATCGTACCACTCCGTCATACGTAGCATTTACCGATACT 1101861 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 |||| ||| |||||||||||||| || |||| | ||| ||| | || || | Sbjct 1101860 GAACGTCTAATTGGAGATGCTGCCAAGAATCAGGTGGCAATGAATGCACACAACACGGTA 1101801 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || || | ||| | ||||||||||| || |||| ||| || || ||||| ||||| Sbjct 1101800 TTCGACGTCAAACGGTTGATTGGTCGCAAGTTTGCCGATTCCGAGGTACAATCGGATATC 1101741 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAAC------CATATATAGAAGCA 474628 || ||||| || || || | || | || |||| || | | ||| Sbjct 1101740 AAGCACTGGCCGTTCAAAGTCGTTTGTGGTCCTGA-AAACAAGCCTCAAGTGGTGGTGCA 1101682 Query 474629 ATACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTTTTAGC 474687 || || ||| ||| | ||| | |||||| || || | ||||| || ||||| | Sbjct 1101681 ATTCAA--AGGCGAATCAAAA-ACTTTTCAGCCTGAGGAGATTTCATCGATGGTGCTCAT 1101625 Query 474688 CAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747 || ||| | | || ||| | | || || |||| | ||||||| | || Sbjct 1101624 TAAGATGCGTGAGATTGCCGAAGCATTTATCGGTAAACAAGTGAGAAATGCAGTTGTGAC 1101565 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 ||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||| Sbjct 1101564 GGTTCCAGCATATTTTAATGATTCGCAACGTCAGGCAACCAAAGATGCGGGTGCAATTGC 1101505 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 ||| | ||||| | || ||||| ||||||||||| || || ||| | || ||||| || Sbjct 1101504 TGGTTTGAATGTGCTTCGAATTATCAATGAACCAACTGCTGCGGCAATCGCGTATGGACT 1101445 Query 474868 TGATAAGAA 474876 || ||||| Sbjct 1101444 GGACAAGAA 1101436 Score = 132 bits (146), Expect = 3e-25 Identities = 528/820 (64%), Gaps = 31/820 (4%) Strand=Plus/Minus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGG 475423 ||||| || || || | || | || || ||||||||||| ||| || | || | Sbjct 1101341 GCAACTGCCGGTGACACCCACTTAGGAGGAGAAGATTTTGACAATCGATTAGTTGAGTAT 1101282 Query 475424 TGTGTTGAAGATTTCAAGAGGAAAAAT--AAAG--TTGATCTTTCAA-CATC-TGCTAAA 475477 | ||||| || || ||| | ||| || |||| || || |||| || | |||| Sbjct 1101281 TTTGTTGCGGAATTTAAGCGCAAACATCGAAAGGATTTGTCGGTCAATCAACGTGCT--- 1101225 Query 475478 GCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACT 475537 ||| | |||||| | || || || || || || ||||| | | ||| | | | Sbjct 1101224 ---TTACGTCGTCTTCGTACGGCATGCGAGCGCGCAAAGCGGACGTTGTCTACGTCAGCC 1101168 Query 475538 CAAAC-TACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTAC 475596 || | ||| | ||| ||||||| | ||||| || || |||| ||| | ||||| Sbjct 1101167 CAGGCGTAC-CTCGAAATTGATTCGTTATTTGACGGCATCGATTTTAACTCGACCATTAC 1101109 Query 475597 AAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGA 475656 | | || ||||||||| ||||| |||| |||| | || || || || ||||| | Sbjct 1101108 ACGAGCGCGTTTTGAAGATCTTTGTGCTGAGTACTTTCGGAAGACCATGGATCCCGTGGC 1101049 Query 475657 ACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGG 475716 ||||| || ||||||| || || |||| || || ||||||||||||||||||| Sbjct 1101048 TCAAGTACTACGAGATTCCAAGCTGTCCAAAAGTCAGGTGAATGAAATTGTTCTTGTAGG 1100989 Query 475717 AGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAA 475776 ||||||||| |||||||||| | ||||||| | |||||| || || | Sbjct 1100988 AGGTTCAACGCGAATTCCAAAGGTGCAGCAAATGCTGATGGACTTTTTTAACGGCAAGGA 1100929 Query 475777 ----GTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAG 475832 |||||| | | || || ||||| ||||| || ||||| ||| | || || | Sbjct 1100928 TCTGTTTAAATCGA----TCAACCCAGATGAGGCTGTAGCGTATGGTGCTACAGTGCAGG 1100873 Query 475833 CAGCTATTTTA---TCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACG 475889 | || |||||| | || | || | |||| | | | || | || | |||| Sbjct 1100872 CGGCAATTTTAAGTGGAAGTGAGTCTTCTGCGAAATTGCAAGACCTTTTGCTATTAGACG 1100813 Query 475890 TAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACA 475949 | | || | || | || || ||||| | ||| || ||||||| || || ||| Sbjct 1100812 TGGCGCCTTTGTCTCTTGGACTAGAAACTGCTGGTGGAGTTATGACCAAGCTCATTCCTC 1100753 Query 475950 GAAATACTCCTATCCCATGCAAAAAA---TCAAAAGTATTTTCCACTTATTCTGATAATC 476006 | || || | |||| ||||| || ||| | || || || ||| ||||||| | Sbjct 1100752 GCAACACGACAGTCCC-GGCAAAGAAGATGCAATCG--TTCTCAACATATACTGATAACC 1100696 Query 476007 AAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACA 476066 | | || || ||| | |||||||| ||| | | | || || ||| | Sbjct 1100695 AGTCTGGCGTGTTGATTCAAGTGTTTGAAGGCGAACGGACTATGACACGTGACAATCATT 1100636 Query 476067 AACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTG 476126 ||| || | || | ||| || |||||||| ||| || | || || |||||||||| Sbjct 1100635 TACTGGGCAAATTCAGTCTGGATGGTATTCCGCCTATGCCGCGCGGTGTGCCTCAAATTG 1100576 Query 476127 AAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 | || || ||||| |||||| ||||| ||| | ||||| Sbjct 1100575 ACGTCACATTTGACGTTGATGTGAATGGAATTTTAAATGT 1100536 Score = 86.0 bits (94), Expect = 4e-11 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 290825 AGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCT 290884 || ||||| | | || || || ||||||||||| ||||||| | |||| | ||| Sbjct 1101445 AGTCCATACGCGATTGCCGCAGCAGTTGGTTCATTGATAATTCGAAGCACATTCAAACCA 1101504 Query 290885 GCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACT 290944 |||||| ||| |||| |||||||| ||||||| |||||||||||| || || || Sbjct 1101505 GCAATTGCACCCGCATCTTTGGTTGCCTGACGTTGCGAATCATTAAAATATGCTGGAACC 1101564 Query 290945 GTAATAACAGCTTTTTCCACTT 290966 || | ||| || ||| ||||| Sbjct 1101565 GTCACAACTGCATTTCTCACTT 1101586 >seq2577 Length=255817 Score = 178 bits (196), Expect = 8e-39 Identities = 403/599 (67%), Gaps = 23/599 (4%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||||||| | || || || ||| ||||| | ||| |||||||| | |||||| Sbjct 216305 GGTATTGATCTTGGTACGACGTACTCCTGTGTCGGTGTGTGGCAAAACGACCGTGTAGAA 216364 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || |||||||||||||| ||||| | || || || ||||| || |||| || || || Sbjct 216365 ATCATTGCCAATGACCAGGGTAACCGTACTACTCCGTCATACGTGGCTTTCACCGACACC 216424 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 || | ||| ||||| ||||| ||||| | |||| || || | || || | Sbjct 216425 GAGCGTCTGATTGGTGATGCGGCTAAGAACCAAGTGGCCATGAACGCGCACAACACCGTG 216484 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || |||||||| | ||||||||||| || ||| || | ||| || ||||||| Sbjct 216485 TTCGATGCTAAGCGTTTGATTGGTCGCAAATTTTCGGACCCGCTTGTTCAGGCTGATATC 216544 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAAT---GTTGGTGGTAAACCATATATAGAAG--CAA 474629 || ||||| || ||||||| | | | ||||| ||||| | || | | || Sbjct 216545 AAGCACTGGCCATTCAAGGTGACATCTGGCGCTGGTGACAAACCGCAGATCGTTGTACAG 216604 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTTTTAGCC 474688 | | | || ||| | ||| | || || || ||| ||||||| || ||||| || | Sbjct 216605 TTTAAG--GGCGAATCGAAA-ACCTTCCAGCCTGAAGAAATTTCGTCCATGGTGTTGATC 216661 Query 474689 AAAATGAAACAAACCGCGAGCT----CATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 |||||| | | |||| ||| | |||| | ||||||| |||| || || Sbjct 216662 AAAATGCGTGA----GGTAGCTGAAGCATTTATTGGCAAGGAAGTAAAAAATGCTGTTAT 216717 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 || ||||| || || || || || || || |||||||||||||| || || || ||| Sbjct 216718 CACGGTTCCTGCCTACTTCAACGACTCGCAGCGTCAAGCAACTAAGGACGCTGGTGCAAT 216777 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| |||||||| || | |||||||| || || || || || || || |||| || || Sbjct 216778 TGCTGGTCTTAACGTACTTCGTATTATCAACGAGCCTACGGCTGCTGCTATTGCATACGG 216837 Query 474865 TCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA---TTGTGGAGGTA 474920 | || ||||| | | ||| ||||| || |||||||| | ||||||||| Sbjct 216838 CTTGGACAAGAA---GGGCGGTGAACGCAATGTGTTGATCTTTGATCTTGGTGGAGGTA 216893 >seq1361 Length=1591 Score = 149 bits (164), Expect = 4e-30 Identities = 367/549 (67%), Gaps = 11/549 (2%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 || || ||| | || || ||||| ||||||| ||| ||||| |||| || || Sbjct 375 GGCATCGATCTTGGCACGACTTATTCGTGTGTAGGTGTATGGCAGAATGACCGCGTCGAG 434 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || ||||| || |||||||| || | || || ||||| |||||| | || || || | Sbjct 435 ATCATTGCTAACGACCAAGGCAACCGCACTACTCCATCGTATGTTGCATTCACAGACTCA 494 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 || | |||||||| || || || || |||| | |||| ||| | || || | Sbjct 495 GAGCGCCTTATTGGTGACGCCGCCAAGAATCAGGTTGCAATGAATTCGTCCAACACGGTG 554 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 ||||| || ||| | | |||||||| || | | || || || | | ||||| Sbjct 555 TTTGACGCCAAACGCCTTATTGGTCGCAAATATTCAGACCCCGTCGTAAAGGCCGATATC 614 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATGTT---GGTGGTAAACCATATATAGAAG--CAA 474629 || ||||| || ||||||| | || | |||| ||| || | || || ||| Sbjct 615 AAGCACTGGCCATTCAAGGTGACAGCTGGTCCTGGTGATAAGCCTCAGATTACAGTTCAA 674 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTTTTAGCC 474688 | || | || || || ||| | ||||| || || | ||||| || ||||| | Sbjct 675 TTCAAG--GGCGAGAC-AAAGACATTTCAGCCCGAGGAGATTTCATCTATGGTGCTGATT 731 Query 474689 AAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747 |||||| | || ||| | || |||| |||| || | |||| || ||||| Sbjct 732 AAAATGCGTGAGGTGGCTGAGG-CTTACATTGGCAAAGAGGTGAAAAATGCCGTCATTAC 790 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 |||||||| || |||||||| || |||||||||||||| || ||||| || ||||| Sbjct 791 GGTTCCAGCTTACTTTAATGACTCGCAACGTCAAGCAACAAAGGATGCCGGTGCGATTGC 850 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 || || || || | ||||| ||||| || || ||||| || || |||| || ||||| Sbjct 851 TGGCCTCAACGTGCTGCGTATAATTAACGAGCCGACAGCTGCTGCGATTGCGTACGGTCT 910 Query 474868 TGATAAGAA 474876 |||||||| Sbjct 911 GGATAAGAA 919 >seq1204 Length=1808626 Score = 140 bits (154), Expect = 2e-27 Identities = 400/604 (66%), Gaps = 22/604 (4%) Strand=Plus/Plus Query 474331 AATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGT 474390 ||||||||||||| | || || |||||| |||||| | | ||| | || || || Sbjct 793127 AATTGGTATTGATCTTGGTACGACTTACTCTTGTGTGGGTATTTACAAGGATCAGAAGGT 793186 Query 474391 AGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTT-ACTG 474449 || || ||| | ||||| || ||||| | | || || ||||| ||| | | | | Sbjct 793187 GGAGATCATTCCTAATGATCAGGGTAACCGTATCACGCCTTCATACGTTGCGTGGGATTC 793246 Query 474450 AAAC--TGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTA 474506 |||| ||| | ||| ||||| |||| |||||| |||| ||| | ||| || || | | Sbjct 793247 AAACGATGAGCGTCTGATTGGTGATGGTGCTAAGAATCAGGCTACGATC-AACCCAGAAA 793305 Query 474507 ATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAAT 474566 | || | || |||| || || | ||||||||||| | |||||| | || ||| Sbjct 793306 AAACGTTGTTCGATGTCAAGCGACTTATTGGTCGTAAGTACAATGATAAGTCCGTGCAAG 793365 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 |||| | | | | ||||| | || | | || | ||| || || | ||| | | Sbjct 793366 CTGACAAGAAGCTCTTGCCTTATGAGCTTGTTAACAAGGATGGGAAGCCTTTTATCCAGG 793425 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 | | ||||||| |||||| |||| || || |||| | |||||| | Sbjct 793426 TGGTGATCAAGGGTGAAAAGCGTCAATTTGCACCTGAGGAAGTTTCGGCTATGGTTCTTT 793485 Query 474687 CCAAAATGAAACAAA---CCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || |||||||| | ||| ||| | ||| || | ||||| ||| || || Sbjct 793486 CAAAGATGAAACAGATTTCCGAAGGCT-ACATC--GGCCGTGAAGTGTTTGACGCTGTGG 793542 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || || ||||||||| | ||||| || || |||||||| || || | | Sbjct 793543 TGACAGTGCCTGCCTACTTTAATGATGCCCAACGCCAGGCCACTAAAGACGCTGGTACGA 793602 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | || ||||| | ||| ||||||||||| || || ||||| || || ||||||| | Sbjct 793603 TCGCTGGTCTCACGGTTCAGCGTATTATTAACGAGCCTACAGCTGCTGCCATTGCTTACG 793662 Query 474864 GTCTTGATAAGAATTCTGACAA----AGAAGTAAATGTTTTAATCTTTGATT---GTGGA 474916 || |||| ||||| | ||| |||| ||| |||||| | ||||||| |||| Sbjct 793663 GTATTGACAAGAAGGC--GCAAGGCGAGAA--AAACGTTTTAGTGTTTGATTTGGGTGGT 793718 Query 474917 GGTA 474920 |||| Sbjct 793719 GGTA 793722 >seq321 Length=1809241 Score = 116 bits (128), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | |||||||||||| || ||||| || ||||| || || ||||| Sbjct 557133 ACGCAGACGCAATACAAGATGAAGCGTCGACTCTTTCTGAATGTTATAGTCCGCAAGAGT 557192 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || ||||| ||||||||||| ||||| || || ||||| ||||| || Sbjct 557193 ACGTCCATCTTCGAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGAATACC 557252 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| ||||| || || |||||| ||||| | || | | || || Sbjct 557253 TTCCTTGTCCTGAATTTTCTGCTTGACATTGTCAATGCTGTCCGACGGCTCCACGTCCAG 557312 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || ||||| |||||||| || Sbjct 557313 CGTGATGGTCTTGCCTGTAAGGGTCTTGACGAAAATCTG 557351 >seq1640 Length=1372582 Score = 107 bits (118), Expect = 1e-17 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||||||||| || || |||||| ||||| | ||| ||| | | ||| |||| Sbjct 1113946 ATTGGTATTGATTTGGGTACGACTTACTCATGTGTGGGTGTCTGGAAGGACGGTCAAGTC 1114005 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || || || |||| ||| | || || ||||||| ||| |||||| ||| Sbjct 1114006 GAGATCATCGCAAACAGTGAAGGAAATCGTACTACTCCATCATGGGTTGCTTTTAATGAG 1114065 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATAT-CAAGCTGCATCTAATCCTGTTAATAC 474510 | ||||| ||| ||||| || ||||| ||| || |||||||| |||| | || || Sbjct 1114066 AGTGAACGTCTGATTGGTGAAGCTGC-AAAGATCCAAGCTGCGAGTAATGCCACGAACAC 1114124 Query 474511 TATTTTTGATGCTAAAAGATTGATTGGTCGTAATTT 474546 || |||||||| ||| | | ||||| || | ||| Sbjct 1114125 GATCTTTGATGCCAAACGTATCATTGGCCGCAGTTT 1114160 >seq2047 Length=2271937 Score = 87.8 bits (96), Expect = 1e-11 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 || ||||| |||||||| | ||| ||||| |||||| | || |||||| | || ||||| Sbjct 1917506 GACTTTTCGTCTCCAAACACTGCCAAGGACATGCATGTGGGTCACTTGCGTTCCACAATT 1917447 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 || ||||| | | | | | || |||||| || || || | | || ||| Sbjct 1917446 ATCGGTGATACAATGTCTCGCATTCTTGAATTCCAGGGTCACGATGTGAAGCGTATCAAT 1917387 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAAT 817257 ||||||||||||||||| || |||||||| ||||| || Sbjct 1917386 CATATTGGTGATTGGGGCACTCAATTTGGAATGTTGAT 1917349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268043566477976