Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18]
3,162 sequences; 75,321,785 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq321 96.9 6e-15
>seq321
Length=1809241
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | || || ||||| | ||| | || | |||||| ||| ||||| || |
Sbjct 557127 ACCACCACGCAGACGCAATACAAGATGAAGCGTCGACTCTTTCTGAATGTTATAGTCCGC 557186
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || ||| | || || | || || ||||||||||| | | ||| |||||||||||
Sbjct 557187 AAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGG 557246
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || || || ||||| | || ||||| || | || |||| || ||
Sbjct 557247 AATACCTTCCTTGTCCTGAATTTTCTGCTTGACATTGTCAATGCTGTCCGACGGCTCCAC 557306
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| || || ||||| || || || | || || | ||| |||||||||||
Sbjct 557307 GTCCAGCGTGATGGTCTTGCCTGTAAGGGTCTTGACGAAAATCTGCATTTT 557357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905100224499600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |