Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq731 178 2e-40 >seq731 Length=3487 Score = 178 bits (196), Expect = 2e-40 Identities = 284/406 (70%), Gaps = 24/406 (6%) Strand=Plus/Minus Query 14061 GATTTTCACCACGGCACGCAGGTCATCGAAATTAATGACGGTACGCGTGTTATTTCCACA 14120 |||| ||||||||| || ||| | || || || || || || || |||||| ||| Sbjct 879 GATTATCACCACGGTGTGCGTGTCGTTGAGATCAACGATGGCACCCGCCCTATTTCAACA 820 Query 14121 GTAGCGACTGCAGTCGTTGGCATGGTCTGTACAGCCAGCGATGCAGATGCCACGCTGTTT 14180 ||| || ||| | || | ||||||||||| | | ||||||||||| | |||| Sbjct 819 GTAAGCACGGCAATTGTAAGTATGGTCTGTACCGGCGATGATGCAGATGCGTCCGTGTTC 760 Query 14181 CCCCTCAATGAGCCGGTGCTGATTACCAATGTGCAAAGCGCCATTGCGAAAGCCGGTAAA 14240 ||||||||| | ||||| ||| ||||| | |||| | ||||| | |||| | || | Sbjct 759 CCCCTCAATAAACCGGTCCTGCTTACCGACGTGCTGACCGCCAGCG-GAAAACAGGCGAG 701 Query 14241 AAAGGCACGCTGTCTGCTTCCCTGCAGGCAATCGCCGACCAGTCAAAGCCTGTCACCGTT 14300 ||||||||| | || ||| | ||||| |||||||| |||| || || ||||| Sbjct 700 TCCGGCACGCTGGCCCGCTCTCTGGATGCAATTGCCGACCAAGCAAAACCCGTGACCGTC 641 Query 14301 GTCGTGCGTGTTGCCGAAGGTACCGGAGACGACGCAGAAGCGCAGACCACATCCAACATT 14360 || ||||| ||||| | ||| || | |||||| | || || ||||||||| Sbjct 640 GTTGTGCGCGTTGCTCAGGGT---------GAAACTGAAGCGGAAACAACCTCCAACATT 590 Query 14361 ATCGGCGGC---ACGGATGAGAACGGTAAGTACACCGGTATCAAGGCGCTGTTAACTGCC 14417 ||||||||| || | || ||||||| | || || || || ||||||||| |||| Sbjct 589 ATCGGCGGCGTGACAGCTG---ACGGTAAAAAAACGGGCATGAAAGCGCTGTTATCTGC- 534 Query 14418 GAAGCGGTCAC----CGGTGTTAAGCCGCGCATTCTCGGTGTGCCG 14459 || ||| | ||| ||||||||||||||||| || |||||| Sbjct 533 ---GCAGTCCCAGCTCGGCGTTAAGCCGCGCATTCTTGGCGTGCCG 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95049230886176