Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq112 84.2 2e-11 >seq112 Length=380982 Score = 84.2 bits (92), Expect = 2e-11 Identities = 165/239 (69%), Gaps = 9/239 (4%) Strand=Plus/Minus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 |||||||||||||| || || |||| |||||| | || || || |||||| | | |||| Sbjct 85474 GCGTGGAACCCTGCAGACCTCAACGAAATGGCATTACCACCTTGCCACATGTTTTGCCAA 85415 Query 142630 TTCCACGTCGACTCGAA-GAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTG 142688 || | || | | || | || | |||||||| ||| |||| || || ||||| ||| Sbjct 85414 TTTTATGTAG---CAAATGGAGAG-CTGTCATGTCAGATGTACCAACGCTCGGCCGACAT 85359 Query 142689 GTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGCTCATTGCTC- 142747 | || ||||| || || || ||||| |||||||| || || | || |||||| Sbjct 85358 GGGGCTTGGCGTGCCATTTAATATTGCCAGCTACGCGCTGCTGACGCGTCTTGTTGCTCA 85299 Query 142748 -GCGAATGCGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCAATTCGCACATCTA 142805 | || | || | |||| || || || ||||| | | ||| || |||| ||||| Sbjct 85298 AGTGACT--GGATTAGAACCTGGTGAATTTATCCACGTCATTGGCGATGCGCATATCTA 85242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500479417769120