Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq321 102 8e-17 >seq321 Length=1809241 Score = 102 bits (112), Expect = 8e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATG-G 131960 ||||| ||||| || | ||| | | |||||||| |||||||| ||||| | || | | Sbjct 557133 ACGCAGACGCAATACAAGATGAAGCGTCGACTCTTTCTGAATGTTATAGTC-CGCAAGAG 557191 Query 131961 TACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| |||||||||||| || || | | | || |||||||| || || || || || | Sbjct 557192 TACGTCCATCTTCGAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGAATAC 557251 Query 132021 CTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGA 132080 |||| || || |||||| || || | | || | | || | ||||||||| || | Sbjct 557252 CTTCCTTGTCCTGAATTTTCTGCTTGACATTGTCAATGCTGTCCGACGGCTCCACGTCCA 557311 Query 132081 CCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | || || || || || || || | |||||||||||| Sbjct 557312 GCGTGATGGTCTTGCCTGTAAGGGTCTTGACGAAAATCTGCAT 557354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476592361942320