Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq112 84.2 2e-11 >seq112 Length=380982 Score = 84.2 bits (92), Expect = 2e-11 Identities = 168/249 (67%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 31131 ACGAGTTAATTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATCGCCAAT 31190 ||| || ||||||| | | || |||| |||||| | ||| ||||||||||||||||| Sbjct 85202 ACGCGTCAATTGCTTTTGTAGTGGCTCGACGTGATTTAGATAGATATGCGCATCGCCAAT 85261 Query 31191 AGAGTGTACCAATTCCCCTGGTCTTAGATGGGTCAATTTGGCAATCACATGAACCAAAAG 31250 ||| | ||||| || ||| || |||| || |||| | | | || || Sbjct 85262 GACGTGGATAAATTCACCAGGTTCTAATCCAGTCACTTGAGCAACAAGACGCGTCAGCAG 85321 Query 31251 CGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAA 31310 ||| || || || || || ||||| || || | |||| ||||| || ||||| || | Sbjct 85322 CGCGTAGCTGGCAATATTAAATGGCACGCCAAGCCCCATGTCGGCCGAGCGTTGGTACAT 85381 Query 31311 CAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAA 31370 | ||| || || || | | || |||||||| | |||| || ||||| || || Sbjct 85382 CTGACATGACAGCTCTCCATTTGCTACATAAAATTGGCAAAACATGTGGCAAGGTGGTAA 85441 Query 31371 AGCCATTTC 31379 |||||||| Sbjct 85442 TGCCATTTC 85450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512997322979360