Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq252 123 2e-23 >seq252 Length=912309 Score = 123 bits (136), Expect = 2e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||| ||||||||||| | || || | || |||||||| || Sbjct 785741 CATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACGTTGGATGTGGAACCTTC 785682 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||| | ||||| ||||||||||| || || ||||| || ||||| || || Sbjct 785681 TGACAGCATTGACAATGTCAAGCAAAAAATTCAGGATAAGGAAGGTATTCCACCTGACCA 785622 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGA-CCGTTTCCGATTACA 27165 ||||| || || | ||| ||||| || | || || | ||| || || | || |||| Sbjct 785621 GCAGCGCTTGATTTTCGCTGGCAAGCAGCTTGAGGATGGC-CGATCCCTTGCAGACTACA 785563 Query 27166 ACATTCAAAAGG 27177 ||||||| |||| Sbjct 785562 ACATTCAGAAGG 785551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434901209850240