Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq112 102 7e-17 >seq112 Length=380982 Score = 102 bits (112), Expect = 7e-17 Identities = 193/280 (69%), Gaps = 8/280 (3%) Strand=Plus/Plus Query 29648 AGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCC 29707 || || || ||||| | || |||| || ||||| || | | ||||| ||| || || Sbjct 85221 AGTGGCTCGACGTGATTTAGATAGATATGCGCATCGCCAATGACGTGGATAAATTCACCA 85280 Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767 ||||||| || || || ||||| | | ||| || || | ||||||||| || ||| Sbjct 85281 GGTTCTAATCCAGTCACTTGAGCAACAAGACGCGTCAGCAGCGCGTAGCTGGCAATATTA 85340 Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCC- 29826 || ||||| || ||||||||||| | || | ||||| | ||| || || |||||||| Sbjct 85341 AATGGCACGCCAAGCCCCATGTCGGCCGAGCGTTGGTACATCTGACATGACAGCTCTCCA 85400 Query 29827 GTCGCTCACGTAAAACTG---ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAA 29883 | ||| || ||||| || | ||||| ||||| || || | ||||| | Sbjct 85401 TTTGCT-ACATAAAATTGGCAAAACATG---TGGCAAGGTGGTAATGCCATTTCGTTGAG 85456 Query 29884 GTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCT 29923 |||| |||||||| || ||| ||| ||||| | |||| Sbjct 85457 GTCTGCAGGGTTCCACGCCGACAGGATAATGCGACGGTCT 85496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406147547739532