Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq112 86.0 2e-12 >seq112 Length=380982 Score = 86.0 bits (94), Expect = 2e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 52107 GATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTT 52166 || ||||| || | || ||||| | | | |||||| |||||||| | || |||| Sbjct 85450 GAAATGGCATTACCACCTTGCCACATGTTTTGCCAATTTTATGTAGCAAATGGAGAGCTG 85391 Query 52167 TCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226 || || || |||| || || || ||||||||| | ||||| || ||||| |||||| Sbjct 85390 TCATGTCAGATGTACCAACGCTCGGCCGACATGGGGCTTGGCGTGCCATTTAATATTGCC 85331 Query 52227 AGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTC 52286 ||||| | ||||||||| ||| |||||| || ||| | || ||||||||| Sbjct 85330 AGCTACGCGCTGCTGACGCGTCTTGTTGCTCAAGTGACTGGATTAGAACCTGGTGAATTT 85271 Query 52287 AT 52288 || Sbjct 85270 AT 85269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190088862132820