Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq321 134 3e-26 seq252 100 7e-16 >seq321 Length=1809241 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||||||||| || |||||||| || ||||| || || || | ||| | |||||||| Sbjct 557146 ACAAGATGAAGCGTCGACTCTTTCTGAATGTTATAGTCCGCAAGAGTACGTCCATCTTCG 557205 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || || || || | ||||||||| | | || |||||||| || ||| Sbjct 557206 AGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGAATACCTTCCTTGTCCTGA 557265 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| || |||||| | || | |||||| || ||| || || || || || || ||| Sbjct 557266 ATTTTCTGCTTGACATTGTCAATGCTGTCCGACGGCTCCACGTCCAGCGTGATGGTCTTG 557325 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| ||||| | ||||||||| Sbjct 557326 CCTGTAAGGGTCTTGACGAAAATCTGCATTTT 557357 >seq252 Length=912309 Score = 100 bits (110), Expect = 7e-16 Identities = 146/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || || |||||||| || || | | || ||||| || || || || ||||| || Sbjct 785553 TTCTGAATGTTGTAGTCTGCAAGGGATCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATC 785612 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||||||||| | | || |||||||| || ||||||||||| |||||| | || Sbjct 785613 AAGCGCTGCTGGTCAGGTGGAATACCTTCCTTATCCTGAATTTTTTGCTTGACATTGTCA 785672 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | |||||| ||| || || || | || || || ||||| || | ||||||||| || Sbjct 785673 ATGCTGTCAGAAGGTTCCACATCCAACGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAA 785732 Query 152097 ACCTGCATTTTACCCT-TACTCTAC 152120 | |||||| | |||| |||| ||| Sbjct 785733 ATCTGCATGATTCCCTGTACTATAC 785757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153774055113702