Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3042 134 1e-26 >seq3042 Length=3267112 Score = 134 bits (148), Expect = 1e-26 Identities = 339/507 (67%), Gaps = 14/507 (3%) Strand=Plus/Minus Query 23530 CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTT 23589 |||||||||| |||||| | ||||| ||||| | | || ||||| | || || || Sbjct 2154085 CCTTCATCCCGACTAATGAGCTCATTTGAAAAGCTAAGACCAGGCATCAGACCACGCTTC 2154026 Query 23590 TTAATCCAAAATATTGCAGCA-AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAA 23648 |||| |||||| |||| |||| ||||| || || || ||||||||||| || || ||||| Sbjct 2154025 TTAAGCCAAAAGATTG-AGCAGAATGAGCCTGAGAAAAAAATACCCTCTACTGCAGCAAA 2153967 Query 23649 GGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC----CAtttttttGTCC 23704 || | || | | | || || | | ||| || ||| || || | || Sbjct 2153966 AGCTAACAGCC-TCT-CCGGATATG--AAGATACTCGTGGATCGCACCACTTAAGCGCCC 2153911 Query 23705 AATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTT 23764 ||| ||| || | | || || || ||||||||||| || ||| | | || Sbjct 2153910 AATGAGCTTTTTTTGTGACGCAAGGGATGGTTTCAATTGCACGCAATAGAT--GGTCCTT 2153853 Query 23765 CTTCATTA--TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822 || || || | ||||| ||||| || || | ||||| || || |||||||| Sbjct 2153852 CTCAATCGCGTCCTTGATATACGTATCGATAAGAAGCGAATACACCTCCGAGTGAATATT 2153793 Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAA 23882 |||||||| || ||||| || || ||||| | ||| || | || || || ||||| Sbjct 2153792 CTCAATAGCGATTTGAAAGCCGTAGAAACAGCGAGCCTCTGGCACCTGCACTTCATTGCT 2153733 Query 23883 AAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942 || | |||| | |||||| || ||||| ||||||||||| || || |||||||| || Sbjct 2153732 GAAATTCATAGCCAGATTTTCATTGACAATTCCATCACTAGCTGCGAAAAAAGCAAGCAC 2153673 Query 23943 ATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGA 24002 || || ||||||| | || | ||| | || ||| || |||| || | | Sbjct 2153672 ATGCTTAATAAAATAGCGCTCGTTGTTTGTAAGGCTTGCCCAGTCCTTAAGGTCGTGTAC 2153613 Query 24003 TAAATCAACTTCATCAACTGTCCAAAA 24029 || ||| | ||| ||| ||||||| || Sbjct 2153612 TAGATCGAGTTCCTCAGCTGTCCAGAA 2153586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521467388186800