Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq3101 86.0 8e-12 >seq3101 Length=2481951 Score = 86.0 bits (94), Expect = 8e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 63745 ATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCAAAAAGGTACGTGTGGTAT 63803 ||||| |||| |||||||||||||| || ||| | ||||| |||||| ||| || Sbjct 1891663 ATACCTCAAATTGGTGATAAATTTGCGTCACG-ACACGGACAAAAGGGTACGATTGGAAT 1891721 Query 63804 GATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCAT 63863 || ||||| |||||||||||||| ||||| || || || ||| ||| | || | Sbjct 1891722 GACATATCGTCAAGAAGATATGCCGTTTACAGTGGAAGGGATTACACCTGATATTGTTGT 1891781 Query 63864 CAATCCACACGCTTTTCCCAGTCGTATGACCGTT 63897 |||||| || ||| |||| |||||||| ||| Sbjct 1891782 CAATCCTCATGCTATTCCATCACGTATGACTGTT 1891815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667048833852720