Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq55 100 2e-16 >seq55 Length=263441 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||| |||| || |||||||||| |||||||| || ||| ||| Sbjct 151044 AAAATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACGCTGGACGTGGAGCCC 150985 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || | | | | || | || || |||||| || || ||||| | || || Sbjct 150984 TCGGATAGCATTGACAATGTCAAACAGAAAATTCAGGACAAGGAAGGGATTCCACCCGAC 150925 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || || | || |||||||| ||||| || || |||||| | ||| |||| || ||| Sbjct 150924 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGGACTTTGGCGGACTAC 150865 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||||||||| ||||| || || ||| | ||||| || Sbjct 150864 AATATTCAGAAAGAATCGACGCTGCACCTCGTGTTGCG 150827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428326170090365