Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq154 132 6e-26 >seq154 Length=161528 Score = 132 bits (146), Expect = 6e-26 Identities = 189/265 (71%), Gaps = 1/265 (0%) Strand=Plus/Minus Query 145646 TGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGT 145705 |||||| |||| |||| | | ||||| || || || ||| ||||||| || | | Sbjct 92369 TGGGAATGGGCGTGGGG-TACGCGTCAGTTGTTTCTGTAGTGGCACCACGTGATTTAAAT 92311 Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765 | ||||| || || || | ||||||||| || || || |||| ||| || || | || | Sbjct 92310 ACACGTGTGCATCGCCAATGACGTGGATAAATTCGCCAGGCTTGAGCCCAGTCACTTGAG 92251 Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825 | || | |||||||| | |||||| || || || || ||||| || || ||||||| Sbjct 92250 CAACAAGACGTGTCAGCAGTGCGTAGCTAGCGATATTAAACGGCACACCAAGTCCCATGT 92191 Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACA 145885 | ||||||||||||||| || || || | ||| || ||||| ||||| ||||| | Sbjct 92190 CGGCCGAGCGCTGGTACATTTGACACGACAACTCTCCATTTGCCACATAGAATTGGCAAA 92131 Query 145886 GGAGGTGGCAGGGCGGCAGGGCCAT 145910 | |||||| || || || ||||| Sbjct 92130 ACATGTGGCAAGGAGGAAGTGCCAT 92106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590062911067320