Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq154 104 2e-17 >seq154 Length=161528 Score = 104 bits (114), Expect = 2e-17 Identities = 213/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 ||||| | || || || || || ||||||||| | || |||||||| | ||| || Sbjct 91923 GGGGACCTTGGACCGGTATACGGCTTTCAATGGCGTCACTTTGGAGCCAAGTATACGAAC 91982 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| | | | || ||| ||||| || ||||| | | | || || | | Sbjct 91983 ATGCATGCTGACTACACTGGCCAAGGCGTTGATCAGCTTGCAGAGGTAATCGAAAAGCTG 92042 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 |||||| |||| ||| || | ||| |||| | || ||||| | ||| | Sbjct 92043 CGAACGAATCCAACGGACCGACGGATTGTTTTGTCGGCATGGAATCCAGCCGATTTAAAC 92102 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTG 20457 |||||| | ||||| || || ||| | |||||||| || || || ||| || ||| Sbjct 92103 GAAATGGCACTTCCTCCTTGCCACATGTTTTGCCAATTCTATGTGGCAAATGGAGAGTTG 92162 Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 |||||||||||||| || || || || || |||||||| ||||| || || ||||| || Sbjct 92163 TCGTGTCAAATGTACCAGCGCTCGGCCGACATGGGACTTGGTGTGCCGTTTAATATCGCT 92222 Query 20518 AGTTATGCGCTGCTTAC 20534 || || || ||||| || Sbjct 92223 AGCTACGCACTGCTGAC 92239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399174839101435