Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq593 93.3 4e-14 >seq593 Length=12966 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 24829 ATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCG 24888 ||||||||||| ||||| ||||| || || ||||| || || || | || || ||| || Sbjct 9300 ATCATGCAGATTTTTGTCAAAACGTTGACGGGCAAGACCATTACGCTGGACGTGGAACCG 9241 Query 24889 AGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948 ||||| | || | ||| ||| | ||||| | || |||||| | ||| |||| Sbjct 9240 TCAGACAGCATTGACAATGTAAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGAC 9181 Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGAT 24987 ||||| ||||| || | ||| ||||| ||||| |||||| Sbjct 9180 CAGCAGCGTTTGATCTTTGCTGGCAAGCAACTTGAAGAT 9142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418294400315360