Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4 291 7e-74 seq1 154 1e-32 seq157 147 2e-30 seq55 143 2e-29 seq43 114 1e-20 seq593 111 1e-19 >seq4 Length=584709 Score = 291 bits (322), Expect = 7e-74 Identities = 1217/1906 (64%), Gaps = 67/1906 (4%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 ||| ||||| |||||||| || |||| || |||| || | || |||||||| Sbjct 120967 CTTATCCACGGTAAACTGAATCGCGTCGGCTTTCGGTCGTCCCCGCATGTAGTACATGCC 120908 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 |||||| || || | |||||||||||||| || || ||||| | ||| | ||| ||| Sbjct 120907 CGTCTTGAGCCCTTTTTTCCACGCGTAAAAGTGCATGGACGTGAGTTTGC--TAA-TCGT 120851 Query 22225 CAAGTCC---ATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281 | |||| |||| | || ||||| ||||||||| |||||||| || ||||| || Sbjct 120850 CGGGTCCGCAATGTGAATGTTCAACGATTGACTCTGACAAATAAACGCGCCACGATCCGC 120791 Query 22282 GGCCATATTTATCAATG---TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCT 22338 || || || | || | | || | || ||||| || ||||||||| || Sbjct 120790 GGACAGATCGAGCACGGCCTTTTGCTTG---ATCTCCCACACTGTCTTGTACTTTT---- 120738 Query 22339 GATCTCTAACGGTATC-------GATTCGATCCTCTGGACGGACCCGTTATTGTGTATGA 22391 || | |||| ||| | | |||| | || |||||||| | || | | Sbjct 120737 ---CTTTCACGGCATCTGGCAGTGCGTGGATCTTTTGCACGGACCCACCGTCGTTCAGAA 120681 Query 22392 TCAAATTTTTAA-TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGA 22450 || ||| | | | ||| ||| | || | | ||| ||||| | ||||| Sbjct 120680 TCTGATTCCGCACTTGGGGCGT-CCAGATGCCCAATTCAATCAGCTCTTTCATCAGATAC 120622 Query 22451 CGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510 ||| || | ||||||||| | |||||||||||| | ||| |||||||| || || Sbjct 120621 TTGTTTACGATCGTAAACTCGCCAGCCAAGACGCGGCGATTGTACATGTTGGACGTAAAG 120562 Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570 || || | ||||| ||||| |||| || ||||||||||| || || ||||| ||||| Sbjct 120561 GGCTCAATCGATTCGTTGTTGCCCAAGATTTGAGCGGTCGACGCCGTGGGCATGGGCGCG 120502 Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTT--TGAAATTTTACTCTTGAGCATCGACCAGT 22628 | || |||||||| | | || |||| ||| |||| || | || || ||| | Sbjct 120501 ACCAAGAGCGAGTTCCGGAGCCCATGCTGCATGACCTTTTCCTTCAGTGC--CGCCCAAT 120444 Query 22629 CCCACAGATCGGA---CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGAC 22685 |||| || | || |||||| || | ||||||| || |||| || | || ||| Sbjct 120443 CCCAGAGGCCCGATGACGGCGTGAC---GCCCCACATGTCAAATTGAAAGATCCCTTGAC 120387 Query 22686 TCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCG 22745 |||| || || | | |||| ||||||||||| | ||||| || | || Sbjct 120386 TCGCGGGCGACCCCTTGAACGTCTCGTACGGACCCACGGCCATTGCAAGCTCCATGGACG 120327 Query 22746 CCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGA 22805 |||| || ||||||| || || || |||||||| ||||| ||| |||| Sbjct 120326 TTTCCATCGACGCGTAATAGATCGTTTCAAAGATTTTTCGATTCAAGTCGCGTGCGGATT 120267 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| || | | | | ||| | | || || || |||| ||||| ||||| || | Sbjct 120266 GGCTCTCAAATGCAAAATTCATGAGAATAAAAGCATCAGCCAATCCCTGCACGCCAATGC 120207 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAAT 22925 ||| ||| |||| || ||| ||| || || || |||| ||||| | || | Sbjct 120206 CGACCGGGCGGTGGCGCATATTGGACGTTTGGGCTTCTGGCACTGGATAGTAGTTGACGT 120147 Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985 | || |||| ||||| | ||||| | ||| | ||| Sbjct 120146 CAATGACCTTGTTTAAGTTGCGCGTCACCACTTTGACCACGTCGTAGAGTTTCCGGTAGT 120087 Query 22986 CGTAAACGCCCGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGG 23045 | | || || ||| |||| ||||| | ||| | ||| || | ||||| |||| Sbjct 120086 CAAAGACCCCGTCTTGCACAA---ACTTGGGCAAGGCCACCGACGCCAAGTTGCACACGG 120030 Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105 |||| ||||| ||||| || || | | ||| || | ||| || | |||| Sbjct 120029 CCACTTCGTCCGAAGACGTATATTCCATCACTTCACAGCACAAATTACTCGATCGGATCG 119970 Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165 |||| | || |||||| ||| || || | || || ||||||||||| || Sbjct 119969 TGCCAAGGTTTTGCTGGTTCGATTTGCGGTTCGCGGCGTCTTTATAGAGCATGTAAGGGA 119910 Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGT--CTGAGC-GTGAACAC 23222 ||||||||| | ||| | |||| |||||| | |||||| ||| || ||| | Sbjct 119909 CGCCCGTCTCAATCTGAGCGTCGAGGATCGCAAAC--CATAGTTGCTGCGCATTGATCGT 119852 Query 23223 GTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282 | || | | | |||||| | ||||||| |||||| || ||||| || |||| Sbjct 119851 CTTGCGGGCA-CGGCCTTCCTGTTCGTACTGGACGTACAAGGCCTCAAACGCGTCACCCC 119793 Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT-- 23340 ||| ||| ||| || |||| || | ||||| | |||||||||| | | |||| Sbjct 119792 AACGTTCGTACAGACCCGGCGCTTCGTTGGGACAAAAGAGACTCCAC---GTGCCATTGG 119736 Query 23341 -TTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 ||| ||||| ||||||| |||||||| | ||| | || | |||| || || || | Sbjct 119735 CTTCCACGCGCTTCATAAAGAGATCCGGGACCCACAAGGCAAAAAACAAATCCCGAGCAC 119676 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | | ||| |||||| ||| || ||| || | ||| || ||||| || || |||| Sbjct 119675 GATGCAACTCGTTGCCGTGGTTTTTCCGCAACTCTAGAAACTCAAACACATCGGCGTGCC 119616 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| || || | |||||||| ||| | ||| || || ||||| ||||| | Sbjct 119615 AGGGCTCTAGATAGATGGCAAACGAGCCTTTGCGCTTCCCACCACCTTGATCAACGTACC 119556 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 | ||||||| ||| | || | | ||| || | || || || |||| ||| | || Sbjct 119555 GCGCCGTGTCATTGAAGACGCGCAACATTGGAATGATGCCATTCGACGACCCG--TTCG- 119499 Query 23580 CCGCCACACTCGAACCTTTT----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635 ||| | | | || || || |||| |||||| | || || || || ||| Sbjct 119498 -TGCCTCGGATGTAGCTGTTGGTGGCACGAATGTTGTGCATACTGATCCCGATCCCGCCG 119440 Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695 || ||||||| || ||| ||||| || || ||||| || ||||| || || ||| Sbjct 119439 GCCCATTTCGAAATGCACGCACATTGCTTGAGCGTGTCATAAATGCCTTCAATCGAGTCA 119380 Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755 |||| | || | | || ||||| || | || | || || | || || Sbjct 119379 TCTTGCATGGCCAAGAGAAAGCACGACGAGAGCTGTGGACGAGGAGTGCCTGCGTTAAAG 119320 Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCG 23815 || ||||| | ||||| |||||| || | |||||| || | ||||| || | ||| Sbjct 119319 AGCGTCGGTGTCGCGTGGGTAAAGAATTTCTGCGACATGAGCTCATACGTCTCAAGCGCG 119260 Query 23816 GCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTC 23875 || | ||||| | ||| || || | || || || | | ||| | ||| || | | Sbjct 119259 GCCTTGATGTCGTGCTTGTGGATGCCCAATGCCACACGGAGAAGCATCTGTTGCGGACGC 119200 Query 23876 TCGACCGTGAC---GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCA 23932 ||||| ||| ||| || | || || || || | | ||||||||| ||| Sbjct 119199 TCGAC---GACTTTGCCATTGACACGAAAGAGGTACCCTCGCTCGAGCGTTTTAAACCCA 119143 Query 23933 AAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || ||||| || | |||||| || |||| | ||||| ||||||| Sbjct 119142 AAGTAGTCGTATTCAAAGTCCCGGTCGTATATGATGGCGGAATTCA 119097 >seq1 Length=763219 Score = 154 bits (170), Expect = 1e-32 Identities = 587/900 (65%), Gaps = 36/900 (4%) Strand=Plus/Minus Query 57527 GAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAA 57586 |||| || | | ||||| | ||||| ||| | | | || | ||| | |||||||| Sbjct 607776 GAATTCCAATCGCTTTGTGCTCTTTCCCATTCAGGAGCACGAAGTGTGGCAGATGTACAA 607717 Query 57587 AAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGA 57646 || || ||||| || |||||||| | || ||| | || ||| | ||||||| || Sbjct 607716 GAAAGCTGAAGCTTCTTTTTGGACAGCTGAGGAACTCGATCTGGTGCACGATCTGAAAGA 607657 Query 57647 TTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGC 57706 ||||| | ||||| || ||| | |||| ||||| || ||| | || || || || Sbjct 607656 TTGGGCTAGCCTCACGGACAACGAGCGTTATTTCATTAAGCATGTGCTCGCTTTCTTTGC 607597 Query 57707 CGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA-GAAGTGCAAG 57765 || || || ||||| || || ||| | | | | ||||| ||| |||||||| | Sbjct 607596 TGCTAGTGACGGCATTGTGAATGAAAATCTAGCCATGA-ATTTTAGCAACGAAGTGCAGG 607538 Query 57766 TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAA 57825 || | ||||| | ||||||||||| |||||| | || || || || | || || ||| Sbjct 607537 TGCCAGAGGCTCGCTGCTTTTACGGGTTTCAAATCGCAATCGAGAATATACACTCGGAAG 607478 Query 57826 TGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA-CGAGAAACGTAGACTGTTC 57884 |||| ||||| | || || ||||| | || ||| ||| ||||| | | | | | Sbjct 607477 TGTACTCGCTTTTGATTGACACGTATATTAAAGAC-GCGATTGAGAA--GGACCATCTAC 607421 Query 57885 AAC--GCGATCGAAACAATGCC-CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGG 57941 || || ||||| || || || ||| || |||| || || | ||| | | || ||| Sbjct 607420 TACGTGCTATCGAGACTATCCCTTGCG-TCACCAAAAAAGCGCACTGGGCTCTGAAGTGG 607362 Query 57942 ATAAAAAGCG--CCACGG----CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995 ||| |||||| | | | | || |||| | || || || || || Sbjct 607361 ------TGCGATCCACGGGTCTCTTCCTATCCAGAACGGCTTTTGGCCTTTGCTGCAGTT 607308 Query 57996 GAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCT 58054 ||||| || || || || ||| || ||| | || |||||| | ||||| ||||| | Sbjct 607307 GAAGGCATTTTTTTCTCTGGCTCATTCTGC-TCCATCTTTTGGCTCAAGAAGCGCGGTTT 607249 Query 58055 GATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGA 58114 ||||| || || | ||| |||||| | || || ||||||||| | || || || Sbjct 607248 AATGCCTGGTCTAAGCTTTTCAAACGAGCTTATTAGCCGGGACGAGGGTATGCACACGGA 607189 Query 58115 TTTTGCGTGCCTAATGTACTCTCACATT-GTCAATAAACCGACGCGGGATCGCATCTTGG 58173 ||||||||||| ||||||| || ||| |||| || | | | | ||| | | Sbjct 607188 CTTTGCGTGCCTTTTGTACTC-CAAATTGGTCACCAAGCTGCCAGAATACCGCGTGCACG 607130 Query 58174 ACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGG 58233 | || || ||| || || ||||| ||| | ||||| || || | || ||||| | Sbjct 607129 AAATCATTCGCGATGCTGTGGCGATTGAACACGAGTTCGTGCGTGACTCGCTCCCGGTCG 607070 Query 58234 CCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGAC 58293 || | || |||||| | | |||| ||||||||| ||||| || || | | Sbjct 607069 AGCTGATTGGCATGAACTCGGGCCTCATGTGCCTGTACATTGAATTTGTGGCTGATCGTC 607010 Query 58294 T--TTTGCTCGAACTGATTGGAG--AGCGTCAT-TACAACACGAAAAATCCGTTTGATTT 58348 | ||| |||| ||| |||| | || ||| | | || || || || |||| Sbjct 607009 TGCTTTACTCG--CTG---GGAGTATCCAAGATCTACCATGCAAAGAACCCATTCGATTG 606955 Query 58349 TATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATA 58408 ||| | ||||||| ||| |||||||||| |||||||| || ||| ||| | ||||| Sbjct 606954 GATGGACATGATCTCTCTCCAGGGCAAGACGAACTTTTTTGAGAAACGCGTTGGAGAATA 606895 >seq157 Length=157498 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| |||||||| ||||| || || || ||||| | || ||||| || ||| Sbjct 63222 ATGCAGATTTTTGTAAAGACGCTGACGGGAAAGACAATCACTCTTGATGTTGAGCCTTCC 63163 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | || || |||| || |||||||||||| | || || |||||| Sbjct 63162 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCCCCTGACCAG 63103 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || |||||||| || || ||||| |||||||| ||| | || ||||||| |||||| Sbjct 63102 CAACGTCTAATCTTTGCCGGCAAGCAGTTGGAGGACGGTCGTACGTTGAGCGACTATAAC 63043 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| ||||| || || || || | | ||| | ||||||| Sbjct 63042 ATTCAGAAAGAGTCGACCCTCCACCTTGTGTTGCGTCTGCGTGGCGGTA 62994 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| || || || ||||| | |||||||| || || Sbjct 62994 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACAATCACTCTTGACGTTGAGCCTTCT 62935 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | || || |||| || |||||||||||| | || || |||||| Sbjct 62934 GACTCGATCGATAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCCCCTGACCAG 62875 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || |||||||| |||||||| ||| ||| ||||||| || ||| Sbjct 62874 CAACGTCTCATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTGAGCGACTACAAC 62815 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || ||||| ||||| ||||| || || Sbjct 62814 ATCCAGAAAGAGTCGACCCTTCACCTTGT 62786 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || || || || |||| || || || ||| Sbjct 62310 ATGCAGATCTTCGTCAAGACGTTGACGGGGAAGACTATAACTCTCGATGTAGAGCCTTCC 62251 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | || || |||| || |||||||||||| | || || |||||| Sbjct 62250 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCCCCTGACCAG 62191 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || |||||||| |||||||||||| ||| ||||||| || ||| Sbjct 62190 CAACGTCTCATTTTTGCTGGCAAGCAGTTGGAAGACGGACGTACTTTGAGCGACTACAAC 62131 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || ||||| ||||| ||||| || || Sbjct 62130 ATCCAGAAAGAGTCGACCCTTCACCTTGT 62102 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| || || || || || ||||||| || || || Sbjct 62538 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACTATAACTCTCGACGTAGAGCCTTCT 62479 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | || || |||| || |||||||||||| | || || |||||| Sbjct 62478 GACTCGATCGATAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCACCTGACCAG 62419 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || |||||||| || |||||||| |||||||| ||| ||| ||||||| || ||| Sbjct 62418 CAACGTCTAATCTTTGCTGGCAAGCAGTTGGAGGACGGACGTACTCTGAGCGACTACAAC 62359 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || ||||| || || || || Sbjct 62358 ATCCAGAAGGAGTCGACCCTCCACCTTGT 62330 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| |||||| |||| || || || || || |||| || || || || Sbjct 62767 CATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACTATAACTCTCGATGTGGAGCCTTC 62708 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || |||| || |||||||||||| | || || || || Sbjct 62707 CGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCCCCTGATCA 62648 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| |||||||| || |||||||| |||||||| ||| ||| |||| || || || Sbjct 62647 GCAACGTCTAATCTTTGCTGGCAAGCAGTTGGAGGACGGACGTACTTTGAGTGACTACAA 62588 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || ||||| ||||| || || Sbjct 62587 CATCCAGAAGGAGTCGACCCTTCACCTTGT 62558 >seq55 Length=263441 Score = 143 bits (158), Expect = 2e-29 Identities = 177/242 (73%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| ||||| ||||| || || || | ||||| || || Sbjct 151044 AAAATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACGCTGGACGTGGAGCCC 150985 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || || || | || | |||||||||| ||| |||||||||||| | || |||||| Sbjct 150984 TCGGATAGCATTGACAATGTCAAACAGAAAATTCAGGACAAGGAAGGGATTCCACCCGAC 150925 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || || |||||||| ||| | ||||| |||| || || || Sbjct 150924 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGGACTTTGGCGGACTAC 150865 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425 || ||||| ||||||||||| || || || || | | ||| | |||||| ||||| Sbjct 150864 AATATTCAGAAAGAATCGACGCTGCACCTCGTGTTGCGTCTGCGTGGCGGTGGCAAGAAG 150805 Query 31426 CG 31427 || Sbjct 150804 CG 150803 >seq43 Length=290853 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| |||| ||||| || || || | ||||| |||||||| Sbjct 98063 CATGCAGATTTTTGTCAAGACGTTGACGGGCAAGACCATTACGCTGGACGTGGAACCGTC 98004 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 98003 AGACAGCATTGACAATGTAAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCA 97944 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||| | || || |||||||| || | ||||| Sbjct 97943 GCAGCGTTTGATCTTTGCTGGCAAGCAACTTGAAGA 97908 >seq593 Length=12966 Score = 111 bits (122), Expect = 1e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| ||||| || || || |||| ||||| || || || | ||||| ||||| Sbjct 9301 AATCATGCAGATTTTTGTCAAAACGTTGACGGGCAAGACCATTACGCTGGACGTGGAACC 9242 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||| ||||| | || | || || |||| ||| ||||||||||||| | ||||| || Sbjct 9241 GTCAGACAGCATTGACAATGTAAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGA 9182 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||||| | || || |||||||| || | ||||| Sbjct 9181 CCAGCAGCGTTTGATCTTTGCTGGCAAGCAACTTGAAGA 9143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755907773360