Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq154 114 1e-20 >seq154 Length=161528 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGA 21005 || ||||| || || || | | ||| | ||| || || || | || || || || ||| Sbjct 92311 TACACGTGTGCATCGCCAATGACGTGGATAAATTCGCCAGGCTTGAGCCCAGTCACTTGA 92252 Query 21006 GCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATG 21065 || | ||| ||||| || |||||||| ||||| |||||||| || || || |||||| Sbjct 92251 GCAACAAGACGTGTCAGCAGTGCGTAGCTAGCGATATTAAACGGCACACCAAGTCCCATG 92192 Query 21066 TCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACAC 21125 ||||| || | |||||||| || || |||| ||| || ||||| || || || || Sbjct 92191 TCGGCCGAGCGCTGGTACATTTGACACGACAACTCTCCATTTGCCACATAGAATTGGCAA 92132 Query 21126 AAAACGTGACAAGGAGGGAGAGCCAT 21151 || | ||| |||||||| || ||||| Sbjct 92131 AACATGTGGCAAGGAGGAAGTGCCAT 92106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427766182941840