Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 >seq1 Length=763219 Score = 87.8 bits (96), Expect = 1e-12 Identities = 120/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 22730 CTATCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCAT 22789 ||||| || ||| || ||||||||||| || ||||||||| | | || ||||| |||| Sbjct 607341 CTATC-CAGAACGGCTTTTGGCCTTTGCTGCAGTTGAAGGCATTTTTTTCTCTGGCTCAT 607283 Query 22790 T-TGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAAC 22848 | ||| |||| || ||||| ||||| || | ||||| || | ||||| ||| Sbjct 607282 TCTGC-TCCATCTTTTGGCTCAAGAAGCGCGGTTTAATGCCTGGTCTAAGCTTTTCAAAC 607224 Query 22849 GAGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 ||| | |||||||| ||||| ||| | ||| |||||||| || Sbjct 607223 GAGCTTATTAGCCGGGACGAGGGTATGCACACGGACTTTGCGTG 607180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356225424772849