Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq157 82.4 6e-11 >seq157 Length=157498 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| || ||||| |||||||| || || || | || ||| | Sbjct 63223 AATGCAGATTTTTGTAAAGACGCTGACGGGAAAGACAATCACTCTTGATGTTGAGCCTTC 63164 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||| | | | ||||| || || || || ||| || || ||||| | ||| ||| | Sbjct 63163 CGACTC-GATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCCCCTGACC 63105 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | || || | ||| ||||| || || || || | || || ||| |||| Sbjct 63104 AGCAACGTCTAATCTTTGCCGGCAAGCAGTTGGAGGACGGTCGTACGTTGAGCGACTATA 63045 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||| |||||||| || | || | |||||| | |||| || || Sbjct 63044 ACATTCAGAAAGAGTCGACCCTCCACCTTGTGTTGCGTCTGCGTGGCGG 62996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425334238753960