Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq593 86.0 4e-12 >seq593 Length=12966 Score = 86.0 bits (94), Expect = 4e-12 Identities = 117/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 39563 CATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTT 39622 |||| || | ||| || || |||| || ||||||||||| || | || | |||||| | Sbjct 9141 CATCTTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGCGGAATGCCTTCCT 9200 Query 39623 TGTCGCATATTTTTTG-TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGT 39680 |||| ||||| || |||| || ||| | | |||||| ||||||||||| || Sbjct 9201 TGTCCTGGATTTTCTGCTTTACATTGTCAATGC--TGTCTGACGGTTCCACGTCCAGCGT 9258 Query 39681 AATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||| || || ||||| || ||||| || || ||||||||| Sbjct 9259 AATGGTCTTGCCCGTCAACGTTTTGACAAAAATCTGCATG 9298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347361628193339