Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5 223 3e-52 seq422 95.1 9e-14 seq195 89.7 4e-12 >seq5 Length=567841 Score = 223 bits (246), Expect = 3e-52 Identities = 975/1519 (64%), Gaps = 49/1519 (3%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || ||||| || || || |||| |||||| || ||| | || | ||| || | Sbjct 389837 TTCGTGATAGTGATTTTGTTTTCTTTGCCTGTTGACTTCTCAACAGCCGACACGTTCAAG 389896 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAG-CA-- 517330 |||||||||||||| | |||||| || || ||||| || || || || | ||| || Sbjct 389897 ATACCATTGGCATCGATATCAAACGTCACGTCAATCTGCGGCACGCCAC---GAGGCATG 389953 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 || || || || || | ||||||| | ||||| || || || || | | || Sbjct 389954 GGCGGAATGCCATCGAGATTAAATTTGCCCAGCAAGTTGTTGTCGCGCGTCATTGACCGC 390013 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 || || ||||| | || || || | | |||||| |||| ||| |||| |||| | Sbjct 390014 TCTCCTTCGAATACCTGAATCAGCACGCCCGGTTGATTGTCTGCATACGTTGAAAATG-T 390072 Query 517451 CTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 ||| || ||||| || | || ||||| | |||| | | ||||| | |||||| Sbjct 390073 CTGCGACTTTTTGGTCGGGACGGTCGTGTTGCGGGCAATCAGCGTCGTCATGACACCACC 390132 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 517569 || || || | ||| | || || || || || || | | || | | || || || Sbjct 390133 AGCAGTCTCAAGACCCAACGACAGCGGCGTCACGTCCAGCAAGAGCAAGTCCTGCAGCTT 390192 Query 517570 TTC--ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 ||| || ||| || || ||| || || || || | || |||||||| ||||| || Sbjct 390193 TTCTGATGAGTCGTGGCCGCTAAGGATCGCAGCCTGGACAGTGGCACCATAGGCAACCGC 390252 Query 517627 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 517686 ||| || || || | | | || | | || ||||| || |||| || || | || Sbjct 390253 TTCGTCCGGGTTGATCGACTTGTTAGGCTCCTTGCCATTAAAGAAATCGGACAGCAACTG 390312 Query 517687 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 517746 ||||| || ||||| | ||||| ||||| | ||| | || ||||| || || Sbjct 390313 CTGCACCTTGGGGATACGGGTAGATCCACCAACAAGTACCACCTCGTGCACTTGACCCTT 390372 Query 517747 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTC 517806 || || | ||| | || || || || || || | | | | || | || Sbjct 390373 CGATAGCTTGGCATCGCGCAGCACCTTCTCCACAGGCTCCATAGTCTTGCGGAAGTAATC 390432 Query 517807 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 517866 || | || || || ||| | ||| | || ||| | || || || ||||| Sbjct 390433 ACCGCACATGTCCTCAAAACGAGCACGAGTGATGGTAGAGTTAAAGTCGATGCCGTCGAA 390492 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | ||| |||| |||||| || ||||| ||| || || || | ||| || ||||| || Sbjct 390493 AAGAGAGTCAATTTCAATATAAGCTTGAGCCGACGACGACAGCGTACGCTTGGCACGCTC 390552 Query 517927 ACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATTCAAATCTGTTTTAT 517982 ||||| || | || | || | || ||| | ||| ||| || || | | Sbjct 390553 GCATGCAGTACGCAGACGACGAAGAGCGCGCTGGTTCTG--TGA--CAGGTCCTTACGGT 390608 Query 517983 ATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACC 518040 ||||| ||| || || | || | ||| | || || || || ||||| || ||||| Sbjct 390609 GTTTTCGCTTAAACTCCTGCACGAA--ATGGTCAACGAGGCGGTTGTCAAAGTCCTCACC 390666 Query 518041 TCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAA 518100 || | | || | || | |||||| | || | ||||| || || || | ||| Sbjct 390667 ACCAAGGTGCGTGTCACCAGCCGTAGCCTTCACCTCGAAAATGCCTTCCTCGATGCTCAA 390726 Query 518101 AAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 518160 || | |||||| || || ||||||| ||||| || ||||| || || | | Sbjct 390727 CAGCGACACATCAAATGTACCGCCACCCAGGTCAAAGATCAGTACGTTGCGCTCACCGCC 390786 Query 518161 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 518220 | | ||||| | ||| ||||| | || || || || || || |||||||| | || Sbjct 390787 CT---TCTTATCTAAACCGTACGCGATGGCGGCGGCCGTCGGCTCGTTAATAATACGCAG 390843 Query 518221 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 518280 ||||| | ||||||||| || || || ||||||||||| | || || |||||||| Sbjct 390844 CACATTTAAACCAGCAATGGCGCCGGCGTCCTTAGTGGCTTGCCGCTGCGAGTCGTTAAA 390903 Query 518281 ATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT--GCC 518338 ||| || || || || |||||||| | | || |||||||||||| ||| |||| ||| Sbjct 390904 ATAGGCCGGCACTGTGATAACGGCGTTCTTGACCTCTTTACCAATA-AAG-GCTTCAGCC 390961 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--GGAATATTGCTTGG 518396 | | ||||||| | || | |||||| || || | || || |||| || Sbjct 390962 ACCTCTCGCATTTTAATCAACACCATTGACGATATCTCCTCAGGCTGGAACGTT------ 391015 Query 518397 ATTCATTTTGATATGATACTTCAAAAT-AT----GGTTTATTACC---AACATTAATAAC 518448 ||| | | | | ||| || ||| || ||||| | ||| | | | | Sbjct 391016 -TTCGTCTCGCCCTTGAACTGCACAATGATCTGCGGTTTGTCACCAGGACCCGCGGTCAG 391074 Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAA 518507 |||||| ||||||| || ||||| | || || |||| | ||||| | | || | Sbjct 391075 TTTAAACGGCCAGTGCTTGATATCGGCCTGCACCACGGGGTC-TGAAAATTTGCGCCCGA 391133 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 | | || || || || |||| ||||||| | || || || | |||| ||||| | Sbjct 391134 TGAGGCGCTTAGCGTCGAAAACCGTATTGGACGAGTTCATCGCCACCTGATTCTTGGCAG 391193 Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 |||| ||||| || | || | || || |||| ||||| || || || ||||| || | Sbjct 391194 CATCACCAATGAGGCGCTCGGAATCCGTGAATGCCACATACGAAGGTGTCGTGCGGTTGC 391253 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 |||| || || |||||||||||||| |||| ||||| || ||||||||| | | Sbjct 391254 CTTGGTCGTTGGCAATAATTTCAACGCGGTCATTCTGCCACACGCCTACACAAGAGTAGG 391313 Query 518688 TTGTTCCTAAATCAATACC 518706 | || || | |||||| || Sbjct 391314 TCGTGCCCAGATCAATGCC 391332 Score = 223 bits (246), Expect = 3e-52 Identities = 975/1519 (64%), Gaps = 49/1519 (3%) Strand=Plus/Minus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || ||||| || || || |||| |||||| || ||| | || | ||| || | Sbjct 393445 TTCGTGATAGTGATTTTGTTTTCTTTGCCTGTTGACTTCTCAACAGCCGACACGTTCAAG 393386 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAG-CA-- 517330 |||||||||||||| | |||||| || || ||||| || || || || | ||| || Sbjct 393385 ATACCATTGGCATCGATATCAAACGTCACGTCAATCTGCGGCACGCCAC---GAGGCATG 393329 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 || || || || || | ||||||| | ||||| || || || || | | || Sbjct 393328 GGCGGAATGCCATCGAGATTAAATTTGCCCAGCAAGTTGTTGTCGCGCGTCATTGACCGC 393269 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 || || ||||| | || || || | | |||||| |||| ||| |||| |||| | Sbjct 393268 TCTCCTTCGAATACCTGAATCAGCACGCCCGGTTGATTGTCTGCATACGTTGAAAATG-T 393210 Query 517451 CTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 ||| || ||||| || | || ||||| | |||| | | ||||| | |||||| Sbjct 393209 CTGCGACTTTTTGGTCGGGACGGTCGTGTTGCGGGCAATCAGCGTCGTCATGACACCACC 393150 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 517569 || || || | ||| | || || || || || || | | || | | || || || Sbjct 393149 AGCAGTCTCAAGACCCAACGACAGCGGCGTCACGTCCAGCAAGAGCAAGTCCTGCAGCTT 393090 Query 517570 TTC--ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 ||| || ||| || || ||| || || || || | || |||||||| ||||| || Sbjct 393089 TTCTGATGAGTCGTGGCCGCTAAGGATCGCAGCCTGGACAGTGGCACCATAGGCAACCGC 393030 Query 517627 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 517686 ||| || || || | | | || | | || ||||| || |||| || || | || Sbjct 393029 TTCGTCCGGGTTGATCGACTTGTTAGGCTCCTTGCCATTAAAGAAATCGGACAGCAACTG 392970 Query 517687 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 517746 ||||| || ||||| | ||||| ||||| | ||| | || ||||| || || Sbjct 392969 CTGCACCTTGGGGATACGGGTAGATCCACCAACAAGTACCACCTCGTGCACTTGACCCTT 392910 Query 517747 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTC 517806 || || | ||| | || || || || || || | | | | || | || Sbjct 392909 CGATAGCTTGGCATCGCGCAGCACCTTCTCCACAGGCTCCATAGTCTTGCGGAAGTAATC 392850 Query 517807 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 517866 || | || || || ||| | ||| | || ||| | || || || ||||| Sbjct 392849 ACCGCACATGTCCTCAAAACGAGCACGAGTGATGGTAGAGTTAAAGTCGATGCCGTCGAA 392790 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | ||| |||| |||||| || ||||| ||| || || || | ||| || ||||| || Sbjct 392789 AAGAGAGTCAATTTCAATATAAGCTTGAGCCGACGACGACAGCGTACGCTTGGCACGCTC 392730 Query 517927 ACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATTCAAATCTGTTTTAT 517982 ||||| || | || | || | || ||| | ||| ||| || || | | Sbjct 392729 GCATGCAGTACGCAGACGACGAAGAGCGCGCTGGTTCTG--TGA--CAGGTCCTTACGGT 392674 Query 517983 ATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACC 518040 ||||| ||| || || | || | ||| | || || || || ||||| || ||||| Sbjct 392673 GTTTTCGCTTAAACTCCTGCACGAA--ATGGTCAACGAGGCGGTTGTCAAAGTCCTCACC 392616 Query 518041 TCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAA 518100 || | | || | || | |||||| | || | ||||| || || || | ||| Sbjct 392615 ACCAAGGTGCGTGTCACCAGCCGTAGCCTTCACCTCGAAAATGCCTTCCTCGATGCTCAA 392556 Query 518101 AAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 518160 || | |||||| || || ||||||| ||||| || ||||| || || | | Sbjct 392555 CAGCGACACATCAAATGTACCGCCACCCAGGTCAAAGATCAGTACGTTGCGCTCACCGCC 392496 Query 518161 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 518220 | | ||||| | ||| ||||| | || || || || || || |||||||| | || Sbjct 392495 CT---TCTTATCTAAACCGTACGCGATGGCGGCGGCCGTCGGCTCGTTAATAATACGCAG 392439 Query 518221 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 518280 ||||| | ||||||||| || || || ||||||||||| | || || |||||||| Sbjct 392438 CACATTTAAACCAGCAATGGCGCCGGCGTCCTTAGTGGCTTGCCGCTGCGAGTCGTTAAA 392379 Query 518281 ATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT--GCC 518338 ||| || || || || |||||||| | | || |||||||||||| ||| |||| ||| Sbjct 392378 ATAGGCCGGCACTGTGATAACGGCGTTCTTGACCTCTTTACCAATA-AAG-GCTTCAGCC 392321 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--GGAATATTGCTTGG 518396 | | ||||||| | || | |||||| || || | || || |||| || Sbjct 392320 ACCTCTCGCATTTTAATCAACACCATTGACGATATCTCCTCAGGCTGGAACGTT------ 392267 Query 518397 ATTCATTTTGATATGATACTTCAAAAT-AT----GGTTTATTACC---AACATTAATAAC 518448 ||| | | | | ||| || ||| || ||||| | ||| | | | | Sbjct 392266 -TTCGTCTCGCCCTTGAACTGCACAATGATCTGCGGTTTGTCACCAGGACCCGCGGTCAG 392208 Query 518449 TTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAA 518507 |||||| ||||||| || ||||| | || || |||| | ||||| | | || | Sbjct 392207 TTTAAACGGCCAGTGCTTGATATCGGCCTGCACCACGGGGTC-TGAAAATTTGCGCCCGA 392149 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 | | || || || || |||| ||||||| | || || || | |||| ||||| | Sbjct 392148 TGAGGCGCTTAGCGTCGAAAACCGTATTGGACGAGTTCATCGCCACCTGATTCTTGGCAG 392089 Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 |||| ||||| || | || | || || |||| ||||| || || || ||||| || | Sbjct 392088 CATCACCAATGAGGCGCTCGGAATCCGTGAATGCCACATACGAAGGTGTCGTGCGGTTGC 392029 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 |||| || || |||||||||||||| |||| ||||| || ||||||||| | | Sbjct 392028 CTTGGTCGTTGGCAATAATTTCAACGCGGTCATTCTGCCACACGCCTACACAAGAGTAGG 391969 Query 518688 TTGTTCCTAAATCAATACC 518706 | || || | |||||| || Sbjct 391968 TCGTGCCCAGATCAATGCC 391950 Score = 154 bits (170), Expect = 1e-31 Identities = 924/1459 (63%), Gaps = 43/1459 (3%) Strand=Plus/Plus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || || || ||| | || | ||| || | |||||||||||||| | ||| || || || Sbjct 351786 GTCGACTTCTCAACAGCCGACACGTTCAAGATACCATTGGCATCGATATCGAACGTTACA 351845 Query 517304 TCAATTTGAGGGACCCCTCTCTGAG-CA--GGTGGGATCCCTTCCAAATTAAATGTTCCC 517360 || |||||||| || || | ||| || || || || || || | ||||||| | ||| Sbjct 351846 TCGATTTGAGGCACGCCAC---GAGGCATGGGCGGAATGCCATCGAGATTAAATTTGCCC 351902 Query 517361 AGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA 517420 || ||| || || ||| | | || || || ||||| | || || || | Sbjct 351903 AGCAAATTGTTGTCGCGAGTCATTGAGCGCTCTCCTTCGAATACCTGAATCAGCACGCCC 351962 Query 517421 GTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTT 517479 | |||||| |||| ||| || | ||| |||| || || || || | || ||||| Sbjct 351963 GGTTGATTGTCTGCATACGTCGAAAACG-TCTGCGACTTCTTCGTCGGCACCGTCGTGTT 352021 Query 517480 TCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGT 517539 | | |||| | | ||||| | |||||| || || || | |||||| || || || || Sbjct 352022 ACGAGCAATCAGCGTCGTCATGACACCACCAGCGGTCTCAAGACCAAGGGACAGCGGTGT 352081 Query 517540 GACATCAACTAGGACAATATTTTGAAGTTTTTC--ATCAGT--TTGACCAACAAGAATAG 517595 ||||| | |||| | | || || || || | ||| ||| || ||| || | Sbjct 352082 CACATCTAGCAGGAGCAAGTCCTGCAGCTTCTCCGACGAGTCGTTG-CCGCTAAGGATCG 352140 Query 517596 CTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTT 517655 | ||||| | | ||| || || ||||| ||||| || || || | | | ||| | | Sbjct 352141 CAGCTTGGACGGTAGCGCCGTAAGCAACCGCTTCGTCCGGGTTGATCGACTTATTAGGCT 352200 Query 517656 TTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 517715 || || || || |||| || || | || ||||| || ||||| | ||||| | Sbjct 352201 CCTTGCCGTTAAAGAAATCGGACAGCAACTGCTGCACCTTGGGGATACGGGTGGATCCAC 352260 Query 517716 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 517775 |||| | ||| | || ||||| || || ||| || | ||| | || || | Sbjct 352261 CAACAAGTACCACCTCGTGCACTTGACTCTTCGACAGCTTGGCATCGCGCAGCACCTTCT 352320 Query 517776 CAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 517835 | || || || | | | || | || || | || ||||| || | || Sbjct 352321 CTACAGGCTCCATAGTTTTGCGGAAGTAATCACCGCACATGTCCTCGAAACGTGCACGAG 352380 Query 517836 TAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGA 517894 | | || ||| | || || || ||||| | ||| |||| |||||| ||| | |||| Sbjct 352381 TGATGGTAGAGTTAAAGTCGATGCCGTCGAAAAGAGAGTCAATTTCAAT-GTATGCTTGA 352439 Query 517895 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT 517954 | ||| || || || | ||| |||||||| ||||| || || | || | || | || Sbjct 352440 GCCGACGACGACAGCGTACGCTTAGCACGCTCACACGCGGTACGCAGACGGCGAAGCGCA 352499 Query 517955 T-TTGCTGAT---TGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCA 518010 ||| | | |||| || | | ||||| |||||| || | | Sbjct 352500 CGTTGGTTCTCCGTGATG----TCCTTGCGGTGTTTTCGCTTGAATTCCTGGGTGAAG-- 352553 Query 518011 TGTTACA--AGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 518068 || | || ||||| || ||||| || ||||| || | | || | || | |||||| Sbjct 352554 TGGTCCACCAGACGGTTGTCAAAGTCCTCACCACCAAGGTGCGTGTCACCAGCCGTAGCC 352613 Query 518069 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCC 518128 | || | ||||| || || |||| || || | |||||| || || |||||| Sbjct 352614 TTCACCTCGAAAATGCCTTCCTCAATGCTCAGCAGCGACACATCAAATGTACCGCCACCC 352673 Query 518129 ATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAA 518188 | ||||| || |||||||| || | | | | || || ||||| || |||| Sbjct 352674 AGGTCAAAGATCAGTACATTGCGCTCACCGCCCT---TCTTGTCCAGACCGTAGGCAATG 352730 Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 ||||| || || || || ||||| || | | ||| ||||||||||| || || || Sbjct 352731 GCAGCGGCCGTCGGCTCGTTAATGATACGGAGAACGTTAAGACCAGCGATGGCACCGGCG 352790 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || || || || || | || || ||||| || ||||| || || ||||| || || | Sbjct 352791 TCCTTGGTCGCCTGACGCTGGGAGTCGTTGAAGTATGCGGGCACCGTAATCACAGCGTTC 352850 Query 518309 GTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGAT 518368 | || || || ||||| |||| ||| | ||| ||| | || | ||| || Sbjct 352851 TTCACCTCCTTGCCAATGAAAGCCTCAGCCACCTCGCGCATCTTAATCAACACCATGGAC 352910 Query 518369 GAAATTTGTTCTGG--GGAATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATAT 518425 || |||| || || |||| | ||| || || |||| || || || || | Sbjct 352911 GAGATTTCCTCGGGTTGGAAAGT--CTTCGACTCGCCCTTGAACTGC-AC--CATGATCT 352965 Query 518426 G--GTTTATTACCAACATTAA---TAACTTTAAATGGCCAGTATTTCATATCTGATTGAA 518480 | | || | ||| | | | || || || ||||||| || || || | || | Sbjct 352966 GCGGCTTGTCGCCAGCGCCAGACGTCACCTTGAACGGCCAGTGCTTAATGTCAGCCTGGA 353025 Query 518481 CACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTG 518540 || |||| || | | |||||| | || || || ||||| | || ||| || Sbjct 353026 CAAGCGGGTCCGAGAACTTGCGACCAATGAGGCGCTTGGCGTCAAACACCGTGTTGTGTG 353085 Query 518541 GATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATG 518600 || || || | |||| ||||| ||||| ||||| ||| | || || || ||||| | Sbjct 353086 CGTTCATAGCCACCTGATTCTTGGCAGCATCACCAATAAGACGCTCCGTGTCCGTAAAAG 353145 Query 518601 AAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCAT 518660 ||||| || ||||| || || ||||| || || || |||||||||||||| | ||| Sbjct 353146 CCACATACGACGGAGTGGTACGGTTACCCTGGTCGTTGGCAATAATTTCAACGCGATCAT 353205 Query 518661 TTTGCCATACACCTACACA 518679 | ||||| || || || || Sbjct 353206 TCTGCCACACGCCAACGCA 353224 Score = 145 bits (160), Expect = 6e-29 Identities = 922/1459 (63%), Gaps = 43/1459 (3%) Strand=Plus/Minus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || || || ||| | || | ||| || | |||||||||||||| | ||| || || || Sbjct 331396 GTCGACTTCTCAACAGCCGACACGTTCAAGATACCATTGGCATCGATATCGAACGTTACA 331337 Query 517304 TCAATTTGAGGGACCCCTCTCTGAG-CA--GGTGGGATCCCTTCCAAATTAAATGTTCCC 517360 || |||||||| || || | ||| || || || || || || | ||||||| | ||| Sbjct 331336 TCGATTTGAGGCACGCCAC---GAGGCATGGGCGGAATGCCATCGAGATTAAATTTGCCC 331280 Query 517361 AGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA 517420 || ||| || || ||| | | || || || ||||| | || || || | Sbjct 331279 AGCAAATTGTTGTCGCGAGTCATTGAGCGCTCTCCTTCGAATACCTGAATCAGCACGCCC 331220 Query 517421 GTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTT 517479 | |||||| |||| ||| || | ||| |||| || || || || | || ||||| Sbjct 331219 GGTTGATTGTCTGCATACGTCGAAAACG-TCTGCGACTTCTTCGTCGGCACCGTCGTGTT 331161 Query 517480 TCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGT 517539 | | |||| | | ||||| | |||||| || || || | |||||| || || || || Sbjct 331160 ACGAGCAATCAGCGTCGTCATGACACCACCAGCGGTCTCAAGACCAAGGGACAGCGGTGT 331101 Query 517540 GACATCAACTAGGACAATATTTTGAAGTTTTTC--ATCAGT--TTGACCAACAAGAATAG 517595 ||||| | |||| | | || || || || | ||| ||| || ||| || | Sbjct 331100 CACATCTAGCAGGAGCAAGTCCTGCAGCTTCTCCGACGAGTCGTTG-CCGCTAAGGATCG 331042 Query 517596 CTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTT 517655 | ||||| | | ||| || || ||||| ||||| || || || | | | ||| | | Sbjct 331041 CAGCTTGGACGGTAGCGCCGTAAGCAACCGCTTCGTCCGGGTTGATCGACTTATTAGGCT 330982 Query 517656 TTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 517715 || || || || |||| || || | || ||||| || ||||| | ||||| | Sbjct 330981 CCTTGCCGTTAAAGAAATCGGACAGCAACTGCTGCACCTTGGGGATACGGGTGGATCCAC 330922 Query 517716 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 517775 |||| | ||| | || ||||| || || ||| || | ||| | || || | Sbjct 330921 CAACAAGTACCACCTCGTGCACTTGACTCTTCGACAGCTTGGCATCGCGCAGCACCTTCT 330862 Query 517776 CAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 517835 | || || || | | | || | || || | || ||||| || | || Sbjct 330861 CTACAGGCTCCATAGTTTTGCGGAAGTAATCACCGCACATGTCCTCGAAACGTGCACGAG 330802 Query 517836 TAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGA 517894 | | || ||| | || || || ||||| | ||| |||| |||||| ||| | |||| Sbjct 330801 TGATGGTAGAGTTAAAGTCGATACCATCGAAAAGAGAGTCAATTTCAAT-GTATGCTTGA 330743 Query 517895 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT 517954 | ||| || || || | ||| |||||||| ||||| || || | || | || | || Sbjct 330742 GCCGACGACGACAGCGTACGCTTAGCACGCTCACACGCGGTACGCAGACGGCGAAGCGCA 330683 Query 517955 T-TTGCTGAT---TGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCA 518010 ||| | | |||| || | | ||||| ||| || || | | Sbjct 330682 CGTTGGTTCTCCGTGATG----TCCTTGCGGTGTTTTCGCTTAAATTCCTGGGTGAAG-- 330629 Query 518011 TGTTACA--AGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 518068 || | || ||||| || ||||| || ||||| || | | || | || | |||||| Sbjct 330628 TGGTCCACCAGACGGTTGTCAAAGTCCTCACCACCAAGGTGCGTGTCACCAGCCGTAGCC 330569 Query 518069 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCC 518128 | || | ||||| || || |||| || || | |||||| || || |||||| Sbjct 330568 TTCACCTCGAAAATGCCTTCCTCAATGCTCAGCAGCGACACATCAAATGTACCGCCACCC 330509 Query 518129 ATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAA 518188 | ||||| || |||||||| || | | | | || || ||||| || |||| Sbjct 330508 AGGTCAAAGATCAGTACATTGCGCTCACCGCCCT---TCTTGTCCAGACCGTAGGCAATG 330452 Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 ||||| || || || || ||||| || | | ||| ||||| ||||| || || || Sbjct 330451 GCAGCGGCCGTCGGCTCGTTAATGATACGGAGAACGTTAAGTCCAGCGATGGCACCGGCG 330392 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || || || || || | || || |||||||| ||||| || || ||||| || || | Sbjct 330391 TCCTTGGTCGCCTGACGCTGGGAGTCGTTAAAGTATGCGGGCACCGTAATCACAGCGTTC 330332 Query 518309 GTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGAT 518368 | || || || ||||| |||| ||| | ||| ||| | | | ||| || Sbjct 330331 TTCACCTCCTTGCCAATGAAAGCTTCAGCCACCTCGCGCATCTTAATCAGCACCATGGAC 330272 Query 518369 GAAATTTGTTCTGG--GGAATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATAT 518425 || |||| || || |||| | ||| || || |||| || || || || | Sbjct 330271 GAGATTTCCTCGGGTTGGAAAGT--CTTCGACTCGCCCTTGAACTGC-AC--CATGATCT 330217 Query 518426 G--GTTTATTACCAACATTAA---TAACTTTAAATGGCCAGTATTTCATATCTGATTGAA 518480 | | || | ||| | | | || || || ||||||| || || || | || | Sbjct 330216 GCGGCTTGTCGCCAGCGCCAGACGTCACCTTGAACGGCCAGTGCTTAATGTCAGCCTGGA 330157 Query 518481 CACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTG 518540 || |||| || | | |||||| | || || || ||||| | || ||| || Sbjct 330156 CAAGCGGGTCCGAGAACTTGCGACCAATGAGGCGCTTGGCGTCAAACACCGTGTTGTGTG 330097 Query 518541 GATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATG 518600 || || || | |||| ||||| ||||| ||||| ||| | || || || ||||| | Sbjct 330096 CGTTCATAGCCACCTGATTCTTGGCAGCATCACCAATAAGACGCTCCGTGTCCGTAAAAG 330037 Query 518601 AAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCAT 518660 ||||| || ||||| || || ||||| || || || |||||||||||||| | ||| Sbjct 330036 CCACATACGACGGAGTGGTACGGTTACCCTGGTCGTTGGCAATAATTTCAACGCGATCAT 329977 Query 518661 TTTGCCATACACCTACACA 518679 | ||||| || || || || Sbjct 329976 TCTGCCACACGCCAACGCA 329958 Score = 104 bits (114), Expect = 2e-16 Identities = 348/534 (65%), Gaps = 11/534 (2%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || || ||||| || || || |||| |||||| || ||| | || | ||| || | Sbjct 385048 TTCGTGATAGTGATTTTGTTTTCTTTGCCTGTTGACTTCTCAACAGCCGACACGTTCAAG 385107 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA-GCA-- 517330 |||||||||||||| | |||||| || || ||||| || || || || | || ||| Sbjct 385108 ATACCATTGGCATCGATATCAAACGTCACGTCAATCTGCGGCACGCCAC---GAGGCATG 385164 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 || || || || || | ||||||| | ||||| || || || || | | || Sbjct 385165 GGCGGAATGCCATCGAGATTAAATTTGCCCAGCAAGTTGTTGTCGCGCGTCATTGACCGC 385224 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 || || ||||| | || || || | | |||||| |||| ||| |||| |||| | Sbjct 385225 TCTCCTTCGAATACCTGAATCAGCACGCCCGGTTGATTGTCTGCATACGTTGAAAAT-GT 385283 Query 517451 CTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 517509 ||| || ||||| || | || ||||| | |||| | | ||||| | |||||| Sbjct 385284 CTGCGACTTTTTGGTCGGGACGGTCGTGTTGCGGGCAATCAGCGTCGTCATGACACCACC 385343 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 517569 || || || | ||| | || || || || || || | | || | | || || || Sbjct 385344 AGCAGTCTCAAGACCCAACGACAGCGGCGTCACGTCCAGCAAGAGCAAGTCCTGCAGCTT 385403 Query 517570 TTC--ATCAGT-TTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 ||| || ||| || || ||| || || || || | || |||||||| ||||| || Sbjct 385404 TTCTGATGAGTCGTGGCCGCTAAGGATCGCAGCCTGGACAGTGGCACCATAGGCAACCGC 385463 Query 517627 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 517686 ||| || || || | | | || | | || ||||| || |||| || || | || Sbjct 385464 TTCGTCCGGGTTGATCGACTTGTTAGGCTCCTTGCCATTAAAGAAATCGGACAGCAACTG 385523 Query 517687 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 517740 ||||| || ||||| | ||||| ||||| | ||| | || ||||| || Sbjct 385524 CTGCACCTTGGGGATACGGGTAGATCCACCAACAAGTACCACCTCGTGCACTTG 385577 >seq422 Length=40671 Score = 95.1 bits (104), Expect = 9e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||| |||||||| ||| | || ||||||||||| |||||||| ||| | || |||||| Sbjct 14140 GGTAAGGAAGGTCGCATTCGTGGTAATTTGATGGGCAAACGTGTAGATTTTTCAGCACGT 14199 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974 || |||||||| | || ||||| |||| | || ||||||| || |||| || Sbjct 14200 ACGGTTATTACCGCCGACCCCAACCTTGCCATTGATCAAGTTGGCGTCCCTCGGTCAATA 14259 Query 668975 GCTAAAAATCTTACT 668989 || | ||||||||| Sbjct 14260 GCGATGAATCTTACT 14274 >seq195 Length=136899 Score = 89.7 bits (98), Expect = 4e-12 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 870792 AGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATT 870851 ||| |||| | | |||| ||| |||||||||| ||| || || ||||| | || || | Sbjct 45000 AGACAATTGTCATTGATTTTTCGTCTCCAAATACTGCCAAGGACATGCACGTAGGTCACT 45059 Query 870852 TAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTA--TTAGAAATGTGTGGACACGA 870909 | |||| || ||||||||||| | | ||| | ||| || ||| | || ||||| Sbjct 45060 TGCGATCCACGATTATTGGTGATACAA--TGTCGCGTATCTTTGAATTTCAGGGTCACGA 45117 Query 870910 TGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATT 870964 ||| | ||||| |||||| | || || ||||| ||||| || || ||||| ||| Sbjct 45118 TGTGAAGCGTATCAATCATATCGGCGACTGGGGTACTCAGTTTGGAATGTTGATT 45172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780728959337398