Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq5 201 8e-46 seq422 95.1 9e-14 seq195 89.7 4e-12 >seq5 Length=567841 Score = 201 bits (222), Expect = 8e-46 Identities = 970/1519 (64%), Gaps = 49/1519 (3%) Strand=Plus/Plus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || || ||||| || || || |||| |||||| || ||| | || | ||| || | Sbjct 389837 TTCGTGATAGTGATTTTGTTTTCTTTGCCTGTTGACTTCTCAACAGCCGACACGTTCAAG 389896 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAG-CA-- 281497 |||||||||||||| | |||||| || || ||||| || || || || | ||| || Sbjct 389897 ATACCATTGGCATCGATATCAAACGTCACGTCAATCTGCGGCACGCCAC---GAGGCATG 389953 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 || || || || || | ||||||| | ||||| || || || || | | || Sbjct 389954 GGCGGAATGCCATCGAGATTAAATTTGCCCAGCAAGTTGTTGTCGCGCGTCATTGACCGC 390013 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 || || ||||| | || || || | | |||||| |||| ||| |||| |||| | Sbjct 390014 TCTCCTTCGAATACCTGAATCAGCACGCCCGGTTGATTGTCTGCATACGTTGAAAATG-T 390072 Query 281618 CTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 ||| || ||||| || | || ||||| | |||| | | ||||| | |||||| Sbjct 390073 CTGCGACTTTTTGGTCGGGACGGTCGTGTTGCGGGCAATCAGCGTCGTCATGACACCACC 390132 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| || || | ||| | || || || || || || | | || | | || || || Sbjct 390133 AGCAGTCTCAAGACCCAACGACAGCGGCGTCACGTCCAGCAAGAGCAAGTCCTGCAGCTT 390192 Query 281737 TTC--ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 ||| || ||| || || ||| || || || || | || |||||||| ||||| || Sbjct 390193 TTCTGATGAGTCGTGGCCGCTAAGGATCGCAGCCTGGACAGTGGCACCATAGGCAACCGC 390252 Query 281794 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 281853 ||| || || || | | | || | | || ||||| || |||| || || | || Sbjct 390253 TTCGTCCGGGTTGATCGACTTGTTAGGCTCCTTGCCATTAAAGAAATCGGACAGCAACTG 390312 Query 281854 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 281913 ||||| || ||||| | ||||| ||||| | ||| | || ||||| || || Sbjct 390313 CTGCACCTTGGGGATACGGGTAGATCCACCAACAAGTACCACCTCGTGCACTTGACCCTT 390372 Query 281914 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC 281973 || || | ||| | || || || || || || | | | || | || Sbjct 390373 CGATAGCTTGGCATCGCGCAGCACCTTCTCCACAGGCTCCATAGTCTTGCGGAAGTAATC 390432 Query 281974 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 282033 || | || || || ||| | ||| | || ||| | || || || ||||| Sbjct 390433 ACCGCACATGTCCTCAAAACGAGCACGAGTGATGGTAGAGTTAAAGTCGATGCCGTCGAA 390492 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | ||| |||| |||||| || ||||| ||| || || || | ||| || ||||| || Sbjct 390493 AAGAGAGTCAATTTCAATATAAGCTTGAGCCGACGACGACAGCGTACGCTTGGCACGCTC 390552 Query 282094 ACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATTCAAATCTGTTTTAT 282149 ||||| || | || | || | || ||| | ||| ||| || || | | Sbjct 390553 GCATGCAGTACGCAGACGACGAAGAGCGCGCTGGTTCTG--TGA--CAGGTCCTTACGGT 390608 Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACC 282207 ||||| ||| || || | || | ||| | || || || || ||||| || ||||| Sbjct 390609 GTTTTCGCTTAAACTCCTGCACGAA--ATGGTCAACGAGGCGGTTGTCAAAGTCCTCACC 390666 Query 282208 TCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAA 282267 || | | || | || | |||||| | || | ||||| || || || | ||| Sbjct 390667 ACCAAGGTGCGTGTCACCAGCCGTAGCCTTCACCTCGAAAATGCCTTCCTCGATGCTCAA 390726 Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 282327 || | |||||| || || ||||||| ||||| || ||||| || || | | Sbjct 390727 CAGCGACACATCAAATGTACCGCCACCCAGGTCAAAGATCAGTACGTTGCGCTCACCGCC 390786 Query 282328 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 | | ||||| | ||| ||||| | || || || || || || |||||||| | || Sbjct 390787 CT---TCTTATCTAAACCGTACGCGATGGCGGCGGCCGTCGGCTCGTTAATAATACGCAG 390843 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||||| | ||||||||| || || || ||||||||||| | || || |||||||| Sbjct 390844 CACATTTAAACCAGCAATGGCGCCGGCGTCCTTAGTGGCTTGCCGCTGCGAGTCGTTAAA 390903 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT--GCT 282505 ||| || || || || |||||||| | | || ||||| |||||| ||| |||| || Sbjct 390904 ATAGGCCGGCACTGTGATAACGGCGTTCTTGACCTCTTTACCAATA-AAG-GCTTCAGCC 390961 Query 282506 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTGG 282563 | | ||||||| | || | |||||| || || | || || ||| || Sbjct 390962 ACCTCTCGCATTTTAATCAACACCATTGACGATATCTCCTCAGGCTGGAACGTT------ 391015 Query 282564 ATTCATTTTGATATGATACTTCAAAAT-AT----GGTTTATTACC---AACATTAATAAC 282615 ||| | | | | ||| || ||| || ||||| | ||| | | | | Sbjct 391016 -TTCGTCTCGCCCTTGAACTGCACAATGATCTGCGGTTTGTCACCAGGACCCGCGGTCAG 391074 Query 282616 TTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAA 282674 |||||| ||||| | || ||||| | || || |||| | ||||| | | || | Sbjct 391075 TTTAAACGGCCAGTGCTTGATATCGGCCTGCACCACGGGGTC-TGAAAATTTGCGCCCGA 391133 Query 282675 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTG 282734 | | || || || || |||| ||||||| | || | || | |||| ||||| | Sbjct 391134 TGAGGCGCTTAGCGTCGAAAACCGTATTGGACGAGTTCATCGCCACCTGATTCTTGGCAG 391193 Query 282735 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 282794 |||| ||||| || | || | || || |||| ||||| || || || ||||| || | Sbjct 391194 CATCACCAATGAGGCGCTCGGAATCCGTGAATGCCACATACGAAGGTGTCGTGCGGTTGC 391253 Query 282795 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 282854 |||| || || |||||||||||||| |||| ||||| || ||||||||| | | Sbjct 391254 CTTGGTCGTTGGCAATAATTTCAACGCGGTCATTCTGCCACACGCCTACACAAGAGTAGG 391313 Query 282855 TTGTTCCTAAATCAATACC 282873 | || || | |||||| || Sbjct 391314 TCGTGCCCAGATCAATGCC 391332 Score = 201 bits (222), Expect = 8e-46 Identities = 970/1519 (64%), Gaps = 49/1519 (3%) Strand=Plus/Minus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || || ||||| || || || |||| |||||| || ||| | || | ||| || | Sbjct 393445 TTCGTGATAGTGATTTTGTTTTCTTTGCCTGTTGACTTCTCAACAGCCGACACGTTCAAG 393386 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAG-CA-- 281497 |||||||||||||| | |||||| || || ||||| || || || || | ||| || Sbjct 393385 ATACCATTGGCATCGATATCAAACGTCACGTCAATCTGCGGCACGCCAC---GAGGCATG 393329 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 || || || || || | ||||||| | ||||| || || || || | | || Sbjct 393328 GGCGGAATGCCATCGAGATTAAATTTGCCCAGCAAGTTGTTGTCGCGCGTCATTGACCGC 393269 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 || || ||||| | || || || | | |||||| |||| ||| |||| |||| | Sbjct 393268 TCTCCTTCGAATACCTGAATCAGCACGCCCGGTTGATTGTCTGCATACGTTGAAAATG-T 393210 Query 281618 CTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 ||| || ||||| || | || ||||| | |||| | | ||||| | |||||| Sbjct 393209 CTGCGACTTTTTGGTCGGGACGGTCGTGTTGCGGGCAATCAGCGTCGTCATGACACCACC 393150 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| || || | ||| | || || || || || || | | || | | || || || Sbjct 393149 AGCAGTCTCAAGACCCAACGACAGCGGCGTCACGTCCAGCAAGAGCAAGTCCTGCAGCTT 393090 Query 281737 TTC--ATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 ||| || ||| || || ||| || || || || | || |||||||| ||||| || Sbjct 393089 TTCTGATGAGTCGTGGCCGCTAAGGATCGCAGCCTGGACAGTGGCACCATAGGCAACCGC 393030 Query 281794 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 281853 ||| || || || | | | || | | || ||||| || |||| || || | || Sbjct 393029 TTCGTCCGGGTTGATCGACTTGTTAGGCTCCTTGCCATTAAAGAAATCGGACAGCAACTG 392970 Query 281854 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 281913 ||||| || ||||| | ||||| ||||| | ||| | || ||||| || || Sbjct 392969 CTGCACCTTGGGGATACGGGTAGATCCACCAACAAGTACCACCTCGTGCACTTGACCCTT 392910 Query 281914 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC 281973 || || | ||| | || || || || || || | | | || | || Sbjct 392909 CGATAGCTTGGCATCGCGCAGCACCTTCTCCACAGGCTCCATAGTCTTGCGGAAGTAATC 392850 Query 281974 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 282033 || | || || || ||| | ||| | || ||| | || || || ||||| Sbjct 392849 ACCGCACATGTCCTCAAAACGAGCACGAGTGATGGTAGAGTTAAAGTCGATGCCGTCGAA 392790 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | ||| |||| |||||| || ||||| ||| || || || | ||| || ||||| || Sbjct 392789 AAGAGAGTCAATTTCAATATAAGCTTGAGCCGACGACGACAGCGTACGCTTGGCACGCTC 392730 Query 282094 ACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATTGATTCAAATCTGTTTTAT 282149 ||||| || | || | || | || ||| | ||| ||| || || | | Sbjct 392729 GCATGCAGTACGCAGACGACGAAGAGCGCGCTGGTTCTG--TGA--CAGGTCCTTACGGT 392674 Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACC 282207 ||||| ||| || || | || | ||| | || || || || ||||| || ||||| Sbjct 392673 GTTTTCGCTTAAACTCCTGCACGAA--ATGGTCAACGAGGCGGTTGTCAAAGTCCTCACC 392616 Query 282208 TCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAA 282267 || | | || | || | |||||| | || | ||||| || || || | ||| Sbjct 392615 ACCAAGGTGCGTGTCACCAGCCGTAGCCTTCACCTCGAAAATGCCTTCCTCGATGCTCAA 392556 Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC 282327 || | |||||| || || ||||||| ||||| || ||||| || || | | Sbjct 392555 CAGCGACACATCAAATGTACCGCCACCCAGGTCAAAGATCAGTACGTTGCGCTCACCGCC 392496 Query 282328 TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAA 282387 | | ||||| | ||| ||||| | || || || || || || |||||||| | || Sbjct 392495 CT---TCTTATCTAAACCGTACGCGATGGCGGCGGCCGTCGGCTCGTTAATAATACGCAG 392439 Query 282388 AACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAA 282447 ||||| | ||||||||| || || || ||||||||||| | || || |||||||| Sbjct 392438 CACATTTAAACCAGCAATGGCGCCGGCGTCCTTAGTGGCTTGCCGCTGCGAGTCGTTAAA 392379 Query 282448 ATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT--GCT 282505 ||| || || || || |||||||| | | || ||||| |||||| ||| |||| || Sbjct 392378 ATAGGCCGGCACTGTGATAACGGCGTTCTTGACCTCTTTACCAATA-AAG-GCTTCAGCC 392321 Query 282506 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG--AGAATATTGCTTGG 282563 | | ||||||| | || | |||||| || || | || || ||| || Sbjct 392320 ACCTCTCGCATTTTAATCAACACCATTGACGATATCTCCTCAGGCTGGAACGTT------ 392267 Query 282564 ATTCATTTTGATATGATACTTCAAAAT-AT----GGTTTATTACC---AACATTAATAAC 282615 ||| | | | | ||| || ||| || ||||| | ||| | | | | Sbjct 392266 -TTCGTCTCGCCCTTGAACTGCACAATGATCTGCGGTTTGTCACCAGGACCCGCGGTCAG 392208 Query 282616 TTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT-CTACCAA 282674 |||||| ||||| | || ||||| | || || |||| | ||||| | | || | Sbjct 392207 TTTAAACGGCCAGTGCTTGATATCGGCCTGCACCACGGGGTC-TGAAAATTTGCGCCCGA 392149 Query 282675 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTG 282734 | | || || || || |||| ||||||| | || | || | |||| ||||| | Sbjct 392148 TGAGGCGCTTAGCGTCGAAAACCGTATTGGACGAGTTCATCGCCACCTGATTCTTGGCAG 392089 Query 282735 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 282794 |||| ||||| || | || | || || |||| ||||| || || || ||||| || | Sbjct 392088 CATCACCAATGAGGCGCTCGGAATCCGTGAATGCCACATACGAAGGTGTCGTGCGGTTGC 392029 Query 282795 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 282854 |||| || || |||||||||||||| |||| ||||| || ||||||||| | | Sbjct 392028 CTTGGTCGTTGGCAATAATTTCAACGCGGTCATTCTGCCACACGCCTACACAAGAGTAGG 391969 Query 282855 TTGTTCCTAAATCAATACC 282873 | || || | |||||| || Sbjct 391968 TCGTGCCCAGATCAATGCC 391950 Score = 141 bits (156), Expect = 7e-28 Identities = 919/1458 (63%), Gaps = 41/1458 (3%) Strand=Plus/Plus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || || || ||| | || | ||| || | |||||||||||||| | ||| || || || Sbjct 351786 GTCGACTTCTCAACAGCCGACACGTTCAAGATACCATTGGCATCGATATCGAACGTTACA 351845 Query 281471 TCAATTTGAGGGACCCCTCTCTGA-GCA--GGTGGGATCCCTTCCAAATTAAATGTTCCC 281527 || |||||||| || || | || ||| || || || || || | ||||||| | ||| Sbjct 351846 TCGATTTGAGGCACGCCAC---GAGGCATGGGCGGAATGCCATCGAGATTAAATTTGCCC 351902 Query 281528 AGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA 281587 || ||| || || ||| | | || || || ||||| | || || || | Sbjct 351903 AGCAAATTGTTGTCGCGAGTCATTGAGCGCTCTCCTTCGAATACCTGAATCAGCACGCCC 351962 Query 281588 GTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTT 281646 | |||||| |||| ||| || | ||| |||| || || || || | || ||||| Sbjct 351963 GGTTGATTGTCTGCATACGTCG-AAAACGTCTGCGACTTCTTCGTCGGCACCGTCGTGTT 352021 Query 281647 TCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGT 281706 | | |||| | | ||||| | ||||||||| || || | |||||| || || || || Sbjct 352022 ACGAGCAATCAGCGTCGTCATGACACCACCAGCGGTCTCAAGACCAAGGGACAGCGGTGT 352081 Query 281707 GACATCAACTAGGACAATATTTTGAAGTTTTTC--ATCAGT--TTGACCAACAAGAATAG 281762 ||||| | |||| | | || || || || | ||| ||| || ||| || | Sbjct 352082 CACATCTAGCAGGAGCAAGTCCTGCAGCTTCTCCGACGAGTCGTTG-CCGCTAAGGATCG 352140 Query 281763 CTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTT 281822 | ||||| | | ||| || || ||||| ||||| || || || | | | ||| | | Sbjct 352141 CAGCTTGGACGGTAGCGCCGTAAGCAACCGCTTCGTCCGGGTTGATCGACTTATTAGGCT 352200 Query 281823 TTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 281882 || || || || |||| || || | || ||||| || ||||| | ||||| | Sbjct 352201 CCTTGCCGTTAAAGAAATCGGACAGCAACTGCTGCACCTTGGGGATACGGGTGGATCCAC 352260 Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942 |||| | ||| | || ||||| || || ||| || | ||| | || || | Sbjct 352261 CAACAAGTACCACCTCGTGCACTTGACTCTTCGACAGCTTGGCATCGCGCAGCACCTTCT 352320 Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002 | || || || | | | || | || || | || ||||| || | || Sbjct 352321 CTACAGGCTCCATAGTTTTGCGGAAGTAATCACCGCACATGTCCTCGAAACGTGCACGAG 352380 Query 282003 TAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGA 282061 | | || ||| | || || || ||||| | ||| |||| |||||| ||| | |||| Sbjct 352381 TGATGGTAGAGTTAAAGTCGATGCCGTCGAAAAGAGAGTCAATTTCAAT-GTATGCTTGA 352439 Query 282062 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----A 282117 | ||| || || || | ||| |||||||| ||||| || || | || | || | | Sbjct 352440 GCCGACGACGACAGCGTACGCTTAGCACGCTCACACGCGGTACGCAGACGGCGAAGCGCA 352499 Query 282118 GGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCA 282177 | | | || |||| || | | ||||| |||||| || | | Sbjct 352500 CGTTGGTTCTCCGTGAT----GTCCTTGCGGTGTTTTCGCTTGAATTCCTGGGTGAA--G 352553 Query 282178 TGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 282235 || | || ||||| || ||||| || ||||| || | | || | || | |||||| Sbjct 352554 TGGTCCACCAGACGGTTGTCAAAGTCCTCACCACCAAGGTGCGTGTCACCAGCCGTAGCC 352613 Query 282236 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCC 282295 | || | ||||| || || |||| || || | |||||| || || |||||| Sbjct 352614 TTCACCTCGAAAATGCCTTCCTCAATGCTCAGCAGCGACACATCAAATGTACCGCCACCC 352673 Query 282296 ATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAA 282355 | ||||| || |||||||| || | | || || || ||||| || |||| Sbjct 352674 AGGTCAAAGATCAGTACATTGCGCTCACCGCC---CTTCTTGTCCAGACCGTAGGCAATG 352730 Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 ||||| || || || || ||||| || | | ||| ||||||||||| || || || Sbjct 352731 GCAGCGGCCGTCGGCTCGTTAATGATACGGAGAACGTTAAGACCAGCGATGGCACCGGCG 352790 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475 || || || || || | || || ||||| || ||||| || || ||||| || || | Sbjct 352791 TCCTTGGTCGCCTGACGCTGGGAGTCGTTGAAGTATGCGGGCACCGTAATCACAGCGTTC 352850 Query 282476 GTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGAT 282535 | || || || ||||| |||| || | ||| ||| | || | ||| || Sbjct 352851 TTCACCTCCTTGCCAATGAAAGCCTCAGCCACCTCGCGCATCTTAATCAACACCATGGAC 352910 Query 282536 GAAATTTGTTCTGG-AGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATAT- 282592 || |||| || || | | | | ||| || || |||| || | || || | Sbjct 352911 GAGATTTCCTCGGGTTGGAAAGT-CTTCGACTCGCCCTTGAACTG---CACCATGATCTG 352966 Query 282593 -GGTTTATTACCA---ACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAAC 282648 || || | ||| || | || || || ||||| | || || || | || || Sbjct 352967 CGGCTTGTCGCCAGCGCCAGACGTCACCTTGAACGGCCAGTGCTTAATGTCAGCCTGGAC 353026 Query 282649 ACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGG 282708 | |||| || | | |||||| | || || || ||||| | || ||| || Sbjct 353027 AAGCGGGTCCGAGAACTTGCGACCAATGAGGCGCTTGGCGTCAAACACCGTGTTGTGTGC 353086 Query 282709 ATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGA 282768 || | || | |||| ||||| ||||| ||||| ||| | || || || ||||| | Sbjct 353087 GTTCATAGCCACCTGATTCTTGGCAGCATCACCAATAAGACGCTCCGTGTCCGTAAAAGC 353146 Query 282769 AACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATT 282828 ||||| || ||||| || || ||||| || || || |||||||||||||| | |||| Sbjct 353147 CACATACGACGGAGTGGTACGGTTACCCTGGTCGTTGGCAATAATTTCAACGCGATCATT 353206 Query 282829 TTGCCATACACCTACACA 282846 ||||| || || || || Sbjct 353207 CTGCCACACGCCAACGCA 353224 Score = 132 bits (146), Expect = 4e-25 Identities = 917/1458 (63%), Gaps = 41/1458 (3%) Strand=Plus/Minus Query 281411 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 281470 || || || ||| | || | ||| || | |||||||||||||| | ||| || || || Sbjct 331396 GTCGACTTCTCAACAGCCGACACGTTCAAGATACCATTGGCATCGATATCGAACGTTACA 331337 Query 281471 TCAATTTGAGGGACCCCTCTCTGA-GCA--GGTGGGATCCCTTCCAAATTAAATGTTCCC 281527 || |||||||| || || | || ||| || || || || || | ||||||| | ||| Sbjct 331336 TCGATTTGAGGCACGCCAC---GAGGCATGGGCGGAATGCCATCGAGATTAAATTTGCCC 331280 Query 281528 AGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA 281587 || ||| || || ||| | | || || || ||||| | || || || | Sbjct 331279 AGCAAATTGTTGTCGCGAGTCATTGAGCGCTCTCCTTCGAATACCTGAATCAGCACGCCC 331220 Query 281588 GTTTGATTATCTGAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTT 281646 | |||||| |||| ||| || | ||| |||| || || || || | || ||||| Sbjct 331219 GGTTGATTGTCTGCATACGTCG-AAAACGTCTGCGACTTCTTCGTCGGCACCGTCGTGTT 331161 Query 281647 TCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGT 281706 | | |||| | | ||||| | ||||||||| || || | |||||| || || || || Sbjct 331160 ACGAGCAATCAGCGTCGTCATGACACCACCAGCGGTCTCAAGACCAAGGGACAGCGGTGT 331101 Query 281707 GACATCAACTAGGACAATATTTTGAAGTTTTTC--ATCAGT--TTGACCAACAAGAATAG 281762 ||||| | |||| | | || || || || | ||| ||| || ||| || | Sbjct 331100 CACATCTAGCAGGAGCAAGTCCTGCAGCTTCTCCGACGAGTCGTTG-CCGCTAAGGATCG 331042 Query 281763 CTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTT 281822 | ||||| | | ||| || || ||||| ||||| || || || | | | ||| | | Sbjct 331041 CAGCTTGGACGGTAGCGCCGTAAGCAACCGCTTCGTCCGGGTTGATCGACTTATTAGGCT 330982 Query 281823 TTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTC 281882 || || || || |||| || || | || ||||| || ||||| | ||||| | Sbjct 330981 CCTTGCCGTTAAAGAAATCGGACAGCAACTGCTGCACCTTGGGGATACGGGTGGATCCAC 330922 Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942 |||| | ||| | || ||||| || || ||| || | ||| | || || | Sbjct 330921 CAACAAGTACCACCTCGTGCACTTGACTCTTCGACAGCTTGGCATCGCGCAGCACCTTCT 330862 Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002 | || || || | | | || | || || | || ||||| || | || Sbjct 330861 CTACAGGCTCCATAGTTTTGCGGAAGTAATCACCGCACATGTCCTCGAAACGTGCACGAG 330802 Query 282003 TAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA-GTTTGA 282061 | | || ||| | || || || ||||| | ||| |||| |||||| ||| | |||| Sbjct 330801 TGATGGTAGAGTTAAAGTCGATACCATCGAAAAGAGAGTCAATTTCAAT-GTATGCTTGA 330743 Query 282062 GTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----A 282117 | ||| || || || | ||| |||||||| ||||| || || | || | || | | Sbjct 330742 GCCGACGACGACAGCGTACGCTTAGCACGCTCACACGCGGTACGCAGACGGCGAAGCGCA 330683 Query 282118 GGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCA 282177 | | | || |||| || | | ||||| ||| || || | | Sbjct 330682 CGTTGGTTCTCCGTGAT----GTCCTTGCGGTGTTTTCGCTTAAATTCCTGGGTGAA--G 330629 Query 282178 TGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCT 282235 || | || ||||| || ||||| || ||||| || | | || | || | |||||| Sbjct 330628 TGGTCCACCAGACGGTTGTCAAAGTCCTCACCACCAAGGTGCGTGTCACCAGCCGTAGCC 330569 Query 282236 CTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCC 282295 | || | ||||| || || |||| || || | |||||| || || |||||| Sbjct 330568 TTCACCTCGAAAATGCCTTCCTCAATGCTCAGCAGCGACACATCAAATGTACCGCCACCC 330509 Query 282296 ATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAA 282355 | ||||| || |||||||| || | | || || || ||||| || |||| Sbjct 330508 AGGTCAAAGATCAGTACATTGCGCTCACCGCC---CTTCTTGTCCAGACCGTAGGCAATG 330452 Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 ||||| || || || || ||||| || | | ||| ||||| ||||| || || || Sbjct 330451 GCAGCGGCCGTCGGCTCGTTAATGATACGGAGAACGTTAAGTCCAGCGATGGCACCGGCG 330392 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475 || || || || || | || || |||||||| ||||| || || ||||| || || | Sbjct 330391 TCCTTGGTCGCCTGACGCTGGGAGTCGTTAAAGTATGCGGGCACCGTAATCACAGCGTTC 330332 Query 282476 GTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGAT 282535 | || || || ||||| |||| || | ||| ||| | | | ||| || Sbjct 330331 TTCACCTCCTTGCCAATGAAAGCTTCAGCCACCTCGCGCATCTTAATCAGCACCATGGAC 330272 Query 282536 GAAATTTGTTCTGG-AGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATAT- 282592 || |||| || || | | | | ||| || || |||| || | || || | Sbjct 330271 GAGATTTCCTCGGGTTGGAAAGT-CTTCGACTCGCCCTTGAACTG---CACCATGATCTG 330216 Query 282593 -GGTTTATTACCA---ACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAAC 282648 || || | ||| || | || || || ||||| | || || || | || || Sbjct 330215 CGGCTTGTCGCCAGCGCCAGACGTCACCTTGAACGGCCAGTGCTTAATGTCAGCCTGGAC 330156 Query 282649 ACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGG 282708 | |||| || | | |||||| | || || || ||||| | || ||| || Sbjct 330155 AAGCGGGTCCGAGAACTTGCGACCAATGAGGCGCTTGGCGTCAAACACCGTGTTGTGTGC 330096 Query 282709 ATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGA 282768 || | || | |||| ||||| ||||| ||||| ||| | || || || ||||| | Sbjct 330095 GTTCATAGCCACCTGATTCTTGGCAGCATCACCAATAAGACGCTCCGTGTCCGTAAAAGC 330036 Query 282769 AACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATT 282828 ||||| || ||||| || || ||||| || || || |||||||||||||| | |||| Sbjct 330035 CACATACGACGGAGTGGTACGGTTACCCTGGTCGTTGGCAATAATTTCAACGCGATCATT 329976 Query 282829 TTGCCATACACCTACACA 282846 ||||| || || || || Sbjct 329975 CTGCCACACGCCAACGCA 329958 Score = 107 bits (118), Expect = 1e-17 Identities = 349/534 (65%), Gaps = 11/534 (2%) Strand=Plus/Plus Query 281381 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 281440 || || ||||| || || || |||| |||||| || ||| | || | ||| || | Sbjct 385048 TTCGTGATAGTGATTTTGTTTTCTTTGCCTGTTGACTTCTCAACAGCCGACACGTTCAAG 385107 Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA-GCA-- 281497 |||||||||||||| | |||||| || || ||||| || || || || | || ||| Sbjct 385108 ATACCATTGGCATCGATATCAAACGTCACGTCAATCTGCGGCACGCCAC---GAGGCATG 385164 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 || || || || || | ||||||| | ||||| || || || || | | || Sbjct 385165 GGCGGAATGCCATCGAGATTAAATTTGCCCAGCAAGTTGTTGTCGCGCGTCATTGACCGC 385224 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 || || ||||| | || || || | | |||||| |||| ||| |||| |||| | Sbjct 385225 TCTCCTTCGAATACCTGAATCAGCACGCCCGGTTGATTGTCTGCATACGTTGAAAAT-GT 385283 Query 281618 CTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 ||| || ||||| || | || ||||| | |||| | | ||||| | |||||| Sbjct 385284 CTGCGACTTTTTGGTCGGGACGGTCGTGTTGCGGGCAATCAGCGTCGTCATGACACCACC 385343 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| || || | ||| | || || || || || || | | || | | || || || Sbjct 385344 AGCAGTCTCAAGACCCAACGACAGCGGCGTCACGTCCAGCAAGAGCAAGTCCTGCAGCTT 385403 Query 281737 TTC--ATCAGT-TTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 ||| || ||| || || ||| || || || || | || |||||||| ||||| || Sbjct 385404 TTCTGATGAGTCGTGGCCGCTAAGGATCGCAGCCTGGACAGTGGCACCATAGGCAACCGC 385463 Query 281794 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTG 281853 ||| || || || | | | || | | || ||||| || |||| || || | || Sbjct 385464 TTCGTCCGGGTTGATCGACTTGTTAGGCTCCTTGCCATTAAAGAAATCGGACAGCAACTG 385523 Query 281854 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 281907 ||||| || ||||| | ||||| ||||| | ||| | || ||||| || Sbjct 385524 CTGCACCTTGGGGATACGGGTAGATCCACCAACAAGTACCACCTCGTGCACTTG 385577 >seq422 Length=40671 Score = 95.1 bits (104), Expect = 9e-14 Identities = 108/143 (76%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 ||| | ||||| |||||||| ||| | || ||||||||||| || ||||| ||| | || Sbjct 14134 TTGCGGGGTAAGGAAGGTCGCATTCGTGGTAATTTGATGGGCAAACGTGTAGATTTTTCA 14193 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTC-- 432399 |||||||| |||||||| | || || || |||| | || ||||||| || |||| Sbjct 14194 GCACGTACGGTTATTACCGCCGACCCCAACCTTGCCATTGATCAAGTTGGCGTCCCTCGG 14253 Query 432400 TCATTATTGCGAAAAATCTTACT 432422 ||| || |||| ||||||||| Sbjct 14254 TCA--ATAGCGATGAATCTTACT 14274 >seq195 Length=136899 Score = 89.7 bits (98), Expect = 4e-12 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 637115 AGAAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATT 637174 ||| |||| | | |||| ||| |||||||||| ||| || || ||||| | || || | Sbjct 45000 AGACAATTGTCATTGATTTTTCGTCTCCAAATACTGCCAAGGACATGCACGTAGGTCACT 45059 Query 637175 TAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTA--TTAGAAATGTGTGGACACGA 637232 | |||| || ||||||||||| | | ||| | ||| || ||| | || ||||| Sbjct 45060 TGCGATCCACGATTATTGGTGATACAA--TGTCGCGTATCTTTGAATTTCAGGGTCACGA 45117 Query 637233 TGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATT 637287 ||| | ||||| |||||| | || || ||||| ||||| || || ||||| ||| Sbjct 45118 TGTGAAGCGTATCAATCATATCGGCGACTGGGGTACTCAGTTTGGAATGTTGATT 45172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740537952657558