Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq55 118 9e-22 >seq55 Length=263441 Score = 118 bits (130), Expect = 9e-22 Identities = 170/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 |||||||| ||||| ||||| || |||| ||||| |||||||| |||| ||| ||| Sbjct 151044 AAAATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACGCTGGACGTGGAGCCC 150985 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 ||| ||| | | || ||||| |||||| ||||| ||||| |||| ||| Sbjct 150984 TCGGATAGCATTGACAATGTCAAACAGAAAATTCAGGACAAGGAAGGGATTCCACCCGAC 150925 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 || || | || || | ||| ||||| || | |||||| ||| |||| || || Sbjct 150924 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGGACTTTGGCGGACTAC 150865 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGC---GCGGTGGCAATAA 111332 ||||| || |||||||| || || || | ||||||||||||| |||||||||| || Sbjct 150864 AATATTCAGAAAGAATCGACGCTGCACCTCGTGTTGCGTCTGCGTGGCGGTGGCAAGAA 150806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421801519828408