Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 >seq1 Length=763219 Score = 102 bits (112), Expect = 8e-17 Identities = 135/185 (73%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 23773 TCTGTTATATATGTATCAATTAGTAAACTA-TACATTTCAGAATGAATATTTTCAATAGC 23831 ||| | ||||| || ||||| | || | | |||| ||| || || ||||| || || || Sbjct 607444 TCTTTAATATACGTGTCAATCAA-AAGCGAGTACACTTCCGAGTGTATATTCTCGATTGC 607502 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 || |||||||| ||||| || | ||| || | || || || || || ||| | | Sbjct 607503 GATTTGAAACCCGTAAAAGCAGCGAGCCTCTGGCACCTGCACTTCGTTGCTAAAATTCAT 607562 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 |||| |||||| || ||||| || |||||||||||||||||||| || |||| || || Sbjct 607563 GGCTAGATTTTCATTCACAATGCCGTCACTAGCAGCAAAGAAAGCGAGCACATGCTTAAT 607622 Query 23952 AAAAT 23956 |||| Sbjct 607623 GAAAT 607627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521475725476200