Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1525 84.2 2e-11 >seq1525 Length=339361 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 101702 TAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGA 101761 || ||||| | ||| || ||| || || || ||||| || |||| |||||||||| Sbjct 147629 TAAATGTGGGTATCACCCATACAGTGAATGAATTCTCCCGGTTGTAGACCAGTGACATGA 147570 Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821 ||||||||| || | | ||||| |||||| || || ||||| ||||| || ||| Sbjct 147569 GCAATCATGATCGTCAGTAACGAATAAGAAGCAATATTGAAAGGCACCCCTAAGCCGATA 147510 Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTT 101881 ||| ||| || |||| || || | || || || ||||||||||||| Sbjct 147509 TCACAACTTCTCTGGTACATCAAGCACGACAATTTCCCGTCTTGAACATAAAATTGACAA 147450 Query 101882 AATACATGACAAGGCGGCAACACCAT 101907 || | || ||||| |||||| |||| Sbjct 147449 AACATGTGGCAAGGAGGCAACGCCAT 147424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361241668048415