Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1525 87.8 1e-12 >seq1525 Length=339361 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 97066 TAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGG 97125 |||||||| | ||| || | | |||||| |||||||| || || | |||||||||| Sbjct 147629 TAAATGTGGGTATCACCCATACAGTGAATGAATTCTCCCGGTTGTAGACCAGTGACATGA 147570 Query 97126 GCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATA 97185 || ||||| || | || ||||| |||||| || ||||||||||||| || ||| Sbjct 147569 GCAATCATGATCGTCAGTAACGAATAAGAAGCAATATTGAAAGGCACCCCTAAGCCGATA 147510 Query 97186 TCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTC 97245 ||| ||| || || | | || || | || || || |||||||| |||| Sbjct 147509 TCACAACTTCTCTGGTACATCAAGCACGACAATTTCCCGTCTTGAACATAAAATTGACAA 147450 Query 97246 AATACATGACAGGGGGGCAACGCCAT 97271 || | || || || ||||||||||| Sbjct 147449 AACATGTGGCAAGGAGGCAACGCCAT 147424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346774849779050