Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq1501 122 3e-23 >seq1501 Length=377221 Score = 122 bits (134), Expect = 3e-23 Identities = 127/164 (77%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 48914 TGAAGCTGTTGGCCAGGGAGATCGGATGCCCGGTGCTCCCGCTCTGCCAGCTCAACCGCG 48973 ||||| | |||||| |||| | | ||||||||| || |||| | ||||| |||||| Sbjct 328735 TGAAGGCGCTGGCCAAGGAGCTGCGCTGCCCGGTGATCGCGCTGTCGCAGCTGAACCGCT 328676 Query 48974 -GATGTGAGTCTCGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGAGTCCGGCGCC 49032 | || || | || ||||| ||||| ||| || | |||||| |||||||| |||||| Sbjct 328675 CGGTG-GAAACGCGGCCGGACAAGCGTCCGATGATGTCCGACCTGCGCGAGTCGGGCGCC 328617 Query 49033 ATCGAGCAAGACGCGGACATCGTGATGTTCGTGTACCGCGATGA 49076 |||||||| |||||||||||| | |||||| | |||||||| || Sbjct 328616 ATCGAGCAGGACGCGGACATCATCATGTTCATCTACCGCGACGA 328573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180436960959240