Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1301 403 2e-107 seq1526 176 4e-39 seq368 150 2e-31 seq1355 145 7e-30 seq1775 143 2e-29 seq1342 125 6e-24 seq312 123 2e-23 seq1422 116 3e-21 seq1110 114 1e-20 >seq1301 Length=515170 Score = 403 bits (446), Expect = 2e-107 Identities = 1211/1853 (65%), Gaps = 27/1853 (1%) Strand=Plus/Plus Query 22154 TAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT 22213 |||||||| || ||||||| ||| | |||||| |||||||||| || || ||||| || Sbjct 331495 TAATACATACCAGTCTTCAAACCAAGCTTCCAACCGTAAAAATGCATTGAAGTCAACTTC 331554 Query 22214 CCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCT 22273 | | | || | | |||| | || || ||||| ||||| || || || || Sbjct 331555 GAAAAGGTTGGTTCGGCAATGTGAATGTTCAAACTTTGACTTTGATCAATGAAAGCACCA 331614 Query 22274 CGATCGGCGGCCATATTTATCAATGTACGCATCGACA--TTTCCCATACGGTCTTGTACA 22331 ||||| || |||| | || |||| || | || | ||||||| || |||||||||| Sbjct 331615 CGATCAGCAGCCAAGTCAAT-AATG-ACTTTTTGAGAAATTTCCCAAACTGTCTTGTACA 331672 Query 22332 GTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATG 22390 | | | | ||| ||| || | | || || | || || || || ||| Sbjct 331673 AGTCCTTCAATTCTTGCGGGAT-GCTGGGAATCTTTTGTACTGAACCACCCGCAGCAATG 331731 Query 22391 ATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGA 22450 || ||| || || | || |||||||| || | | |||||||| || | || | Sbjct 331732 ATGCGATTCTTCATGGATTCATTCCACAATCCCAATTCAGTCAAATCCTTCATCAAGTAT 331791 Query 22451 CGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510 | || || | ||| || || || | || || || || |||||||||||| ||||| Sbjct 331792 TGATTGACAATTTGGAATTCACCAGCTAAAACACGACGAGTGTAAATGTTGGAAGTGAAA 331851 Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570 || || || ||||||||| || || || |||| ||| ||||| |||||||| || || Sbjct 331852 GGCTCAAAGCATTCATTGTAACCAAGAATTTGAGAGGTAGAAGCAGTCGGCATGGGAGCA 331911 Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCC 22630 | | | || || | | || || | ||||| ||| ||| | ||||| ||| Sbjct 331912 AGTAACAAGGAATTACGAACACCATGTTCAGAAATCTTAGCCTTCAAAGCTGACCAATCC 331971 Query 22631 CACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCC 22690 |||| ||||| || |||||||| |||||| || |||||||| || || ||| | Sbjct 331972 CACAAGTCGGAAGGGGTCACATT---CCACATGTCATATTGCAAAACACCCTTGCTCACA 332028 Query 22691 GGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCC 22750 ||||| || ||| |||| || | || | || || | ||| || || ||| Sbjct 332029 GGGCTACCCGGGTAAGTTTGATAGTGTCCTTCAATTTGAGCCAATTCACAAGAAGCTTCC 332088 Query 22751 AACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGA-CGCT 22809 || || || || || || ||||| ||||||| ||| ||||||| | || ||| | | Sbjct 332089 AAGGCACCATAGTAGATGGTCTCAAAGATTTGCTTATTCAATT-GACGAGCGCGTTCACA 332147 Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869 || | ||||| ||||||| | ||| || || || | || ||||| || ||||| || Sbjct 332148 ATCAAATGGCATTCGCATCAGAATGAAAGCATCAGCTAATCCTTGAACTCCAATACCAAT 332207 Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAA-GGATACCAATTCGAATCGA 22928 || || | || ||| || |||| | ||| || || |||| || | Sbjct 332208 GGGACGATGACGCATATTAGAACGACGAGCCT-GTTCAACTGGGTAATAATTGACGTCAA 332266 Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988 | | | |||||||| |||| |||| || | | | || || Sbjct 332267 TGATACGATTCAAGTTCTTGGTGACAACCTTGGCAACATGTTTCAATTCTTTGAAATCAA 332326 Query 22989 AAACGCCCGATTGTACA--ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGC 23046 || | | || | | ||||| | || || || || | |||||| || || Sbjct 332327 AAGTGTTC--TTATCCTTGACAAAGGCAGGCAAAGCAATAGAAGCCAAATTGCAAACAGC 332384 Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 | ||| || | || ||| || |||||||| ||||| | |||| ||| || || || Sbjct 332385 AATCTCATCAGGAGCCGAGTATTCAACAATTTCAGTACACAAATTGGAACATTTGATGGT 332444 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || || ||||| || |||||| | ||||||||| |||||||| || || Sbjct 332445 TCCCAAGTTTTGTTGATTGCTCTTGGAATTGCAAGCATCCTTGTACAGCATGTAAGGAGT 332504 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCG 23226 || || || || || || || | || || ||| | | ||||| ||||| || Sbjct 332505 ACCAGTTTCAACTTGAGATTCCAAAATAGCATTCCAAAGCTTTTGAGCACGAACAACACG 332564 Query 23227 CACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAAC 23285 ||| | || ||||| | |||||||| | ||| | || |||||||| ||||| || Sbjct 332565 -ACGAGCATGACCTTCATTTTCGTACTTCTCGTAAAGAGCTTCAAATTCAGCACCCCAAA 332623 Query 23286 AGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAA 23345 || | || || || ||| | || || | ||| ||| | |||| ||||| Sbjct 332624 CATCAGACAAACCAGGACATTCATTTGGGCAGAAGAGGGACCAGTCTTCGTCAGCTTCAA 332683 Query 23346 CGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCT 23405 | || |||| || | ||| ||||| | ||| ||||||| || || || || || | Sbjct 332684 CACGCTTCATGAACAAATCATTAATCCACAAAGCATAGAACAAGTCACGAGCACGAACTT 332743 Query 23406 CCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCT 23465 | || || || |||||||| ||||||||||||||||| || ||||| || |||||||| | Sbjct 332744 CTTCCTTCCCAGTGTTCTTCTTCAAATCCAAAAAGTCAAAAACGTCAGCGTGCCACGGTT 332803 Query 23466 CGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCG 23525 | | ||| |||||||| || ||||| | |||||| || || ||||| |||||||| |||| Sbjct 332804 CCAAGTAGACGGCAAAAGCACCCGGACGCTTATTACCACCTTGATCAACGTAACGAGCCG 332863 Query 23526 TGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA 23585 |||| ||||| || | ||||| || || ||||| ||||| || ||| | | Sbjct 332864 TGTTATTGTAAACACGAAGCATGGGAACAAGACCATTGGATTGACCATTCGTGCCAGAAA 332923 Query 23586 CACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCG 23645 |||||| || |||| |||||||| || ||||| || || || | ||||| | Sbjct 332924 TGTACGAACCAGCAGCACGAATGTTGTGAATGTTCAAACCAATACCACCAGCAGATTTGG 332983 Query 23646 ATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCG 23705 | |||| || || || | ||| || || || || || || ||| || ||| Sbjct 332984 AAATCAAAGCACAAGTCTTTAAAGTTTCATAAATACCATCAATCGAGTCATCAGACATCG 333043 Query 23706 CGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGC 23765 | |||||| || ||||||| ||| | | ||| |||| ||| || || || Sbjct 333044 TCAACAAGAAGCAAGAAGACAGTTGAGGATGATTAGTACCGGCATGGAAGAGGGTGGGTG 333103 Query 23766 TGGCGTGCGTAAAGTATCCATTC-GACATTAGATTGTACGTGTCGATGGCGGCATCAATG 23824 |||| ||||| || | ||| ||| | |||||||| || || || | |||||| Sbjct 333104 AACCGTGAGTAAAATA-CTTTTCACTCATGAAATTGTACGATTCAATAGCCGAGTCAATG 333162 Query 23825 TCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTG 23884 || ||||| || || ||| || ||||| | ||||| |||||| | || || | Sbjct 333163 TCAGTACCGTGCATTCCTATGCAAACACGCATGAGCATGTGTTGAGGACGTTCAAC---G 333219 Query 23885 ACGC---CGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCA 23941 |||| | |||||||| | || |||| ||||| | || || || ||||| || | Sbjct 333220 ACGCGTTCATTAATTTTCATCAAGTATGCACGTTCAAGAGTCTTGAAACCAAAGTAATTG 333279 Query 23942 TAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGC 23994 || || | |||||||||| | ||||| || |||||||| | |||||||| Sbjct 333280 TAATTGTAATCACGATCGTAGATGATGGCGGAGTTCAAACGATCAGCATTGGC 333332 >seq1526 Length=132622 Score = 176 bits (194), Expect = 4e-39 Identities = 399/595 (67%), Gaps = 19/595 (3%) Strand=Plus/Minus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 || ||| | ||||| || | |||| || |||||| | | ||||| ||||| ||||| Sbjct 119275 TTCGTCCTCTTTCCCATCAAGTATCACGATATTTGGCAATTCTACAAGAAGGCTGAAGCT 119216 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGA------- 57652 || || ||||| | ||||||||| ||||| || ||||| | | ||||||| Sbjct 119215 TCCTTCTGGACTGCCGAAGAAGTTGACCTTTCCAAGGACATAAAACATTGGGACGAAAAG 119156 Query 57653 TTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712 || || || || ||| || ||| || | || ||||| || || || || || Sbjct 119155 TTGACT-AACGA---TGAACGATTCTTTGTTTCTCGTGTTTTGGCTTTCTTTGCTGCCTC 119100 Query 57713 CGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGA 57772 ||||||||||| || || || ||||| | || |||||||||| ||||| | || Sbjct 119099 TGATGGTATTGTCAATGAAAACTTGGTTACTCGTTTCGCACAAGAAGTTCAAGTTCCAGA 119040 Query 57773 GGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTC 57832 || | ||||||||||| || ||| | ||||||||| | || | |||||||| || Sbjct 119039 AGCTCGTTGCTTTTACGGGTTCCAAATCATGATTGAAAACATTCACGCTGAAATGTACTC 118980 Query 57833 GCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGA---CTGTTCAACGC 57889 || ||||| ||||| ||| | ||| | ||| |||| | || ||||| || Sbjct 118979 TCTCCTCATTGATACCTACATTCGTGACCCAGTTGAG---CGTAAATTCCTTTTCAATGC 118923 Query 57890 GATCGAAACAATGCC-CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAA 57948 || || || || || | | ||| |||||||| ||| ||| | || ||||| ||| Sbjct 118922 CATTGACACCATCCCTTGTGTTCG-CAAGAAGGGAGACTGGGCTATGCGTTGGATTGAAA 118864 Query 57949 GCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCT 58008 || | || | || | || | || || || ||||| |||||||| |||| Sbjct 118863 ATCAAACTAGCTGTTTTGGAGAACGCCTTGTTGCTTTTGCTGCCGTGGAAGGTATCTTCT 118804 Query 58009 TTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGA 58068 |||| || ||||| || || || ||| ||||||| ||||| |||||||||| ||| Sbjct 118803 TTTCCGGTTCATTTGCTGCCATTTTCTGGTTGAAGAAGCGCGGGTTGATGCCCGGTTTGA 118744 Query 58069 CGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTG 58123 | || ||| || | || || ||||| ||||| ||| ||||||||| || Sbjct 118743 CCTTCTCCAATGAACTAATCAGCCGTGACGAAGGTCTTCATTGTGATTTTGCCTG 118689 >seq368 Length=262043 Score = 150 bits (166), Expect = 2e-31 Identities = 586/900 (65%), Gaps = 36/900 (4%) Strand=Plus/Minus Query 57527 GAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAA 57586 |||| || | | ||||| | ||||| ||| | | | || | ||| | |||||||| Sbjct 28883 GAATTCCAATCGCTTTGTGCTCTTTCCCATTCAGGAGCACGAAGTGTGGCAGATGTACAA 28824 Query 57587 AAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGA 57646 || || ||||| || || ||||| | || ||| | || ||| | ||||||| || Sbjct 28823 GAAAGCTGAAGCTTCTTTCTGGACAGCTGAGGAACTCGATCTGGTGCACGATCTGAAAGA 28764 Query 57647 TTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGC 57706 ||||| | ||||| || ||| | |||| ||||| || ||| | || || || || Sbjct 28763 TTGGGCTAGCCTCACGGACAACGAGCGTTATTTCATTAAGCATGTGCTCGCTTTCTTTGC 28704 Query 57707 CGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAA-GAAGTGCAAG 57765 || || || || || || || ||| | | | | ||||| ||| |||||||| | Sbjct 28703 TGCTAGTGACGGCATCGTGAATGAAAATCTAGCCATGA-ATTTTAGCAACGAAGTGCAGG 28645 Query 57766 TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAA 57825 || | ||||| | ||||||||||| |||||| | || || || || | || || ||| Sbjct 28644 TGCCAGAGGCTCGCTGCTTTTACGGGTTTCAAATCGCAATCGAGAATATACACTCGGAAG 28585 Query 57826 TGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA-CGAGAAACGTAGACTGTTC 57884 |||| ||||| | || || ||||| | || ||| ||| ||||| | | | | | Sbjct 28584 TGTACTCGCTTTTGATTGACACGTATATCAAAGAC-GCGATTGAGAA--GGACCATCTAC 28528 Query 57885 AAC--GCGATCGAAACAATGCC-CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGG 57941 || || ||||| || || || ||| || |||| || || | ||| | | || ||| Sbjct 28527 TACGTGCTATCGAGACTATCCCTTGCG-TCACCAAAAAAGCGCACTGGGCTCTGAAGTGG 28469 Query 57942 ATAAAAAGCG--CCACGG----CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995 ||| |||||| | | | | || |||| | || || || || || Sbjct 28468 ------TGCGATCCACGGGTCTCTTCCTATCCAGAACGGCTTTTGGCCTTTGCTGCAGTT 28415 Query 57996 GAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCT 58054 ||||| || || || || ||| || ||| | || |||||| | ||||| ||||| | Sbjct 28414 GAAGGCATTTTTTTCTCTGGCTCATTCTGC-TCCATCTTTTGGCTCAAGAAGCGCGGTTT 28356 Query 58055 GATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGA 58114 ||||| || || | ||| |||||| | || || ||||||||| | || || || Sbjct 28355 AATGCCTGGTCTAAGCTTTTCAAACGAGCTTATTAGCCGGGACGAGGGTATGCACACGGA 28296 Query 58115 TTTTGCGTGCCTAATGTACTCTCACATT-GTCAATAAACCGACGCGGGATCGCATCTTGG 58173 ||||||||||| ||||||| || ||| |||| || | | | | ||| | | Sbjct 28295 CTTTGCGTGCCTTTTGTACTC-CAAATTGGTCACCAAGCTGCCAGAATACCGCGTGCACG 28237 Query 58174 ACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGG 58233 | || || ||| || || ||||| ||| | ||||| || || | || ||||| | Sbjct 28236 AAATCATTCGCGATGCTGTGGCGATTGAACACGAGTTCGTGCGTGACTCGCTCCCGGTCG 28177 Query 58234 CCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGAC 58293 || | || |||||| | | |||| ||||||||| ||||| || || | | Sbjct 28176 AGCTGATTGGCATGAACTCGGGCCTCATGTGCCTGTACATTGAATTTGTGGCTGATCGTC 28117 Query 58294 T--TTTGCTCGAACTGATTGGAG--AGCGTCAT-TACAACACGAAAAATCCGTTTGATTT 58348 | ||| |||| ||| |||| | || ||| | | || || || || |||| Sbjct 28116 TGCTTTACTCG--CTG---GGAGTATCCAAGATCTACCATGCAAAGAACCCATTCGATTG 28062 Query 58349 TATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATA 58408 ||| | ||||||| ||| ||||||||||||||||||| || ||| ||| | ||||| Sbjct 28061 GATGGACATGATCTCTCTCCAGGGCAAGACAAACTTTTTTGAGAAACGCGTTGGAGAATA 28002 >seq1355 Length=184863 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| |||||| |||| || || || ||||| | |||||||| || || Sbjct 90883 CATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACAATCACTCTTGACGTTGAGCCTTC 90824 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || |||| || |||||||||||| | || || ||||| Sbjct 90823 CGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCACCTGACCA 90764 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| |||||||| || |||||||| |||||||| ||| ||| ||||||| || || Sbjct 90763 GCAACGTCTAATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTGAGCGACTACAA 90704 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || ||||| ||||| || || Sbjct 90703 CATCCAGAAGGAGTCGACCCTTCACCTTGT 90674 Score = 143 bits (158), Expect = 2e-29 Identities = 159/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| |||||| |||| || || || ||||| | |||||||| || || Sbjct 91112 CATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACAATCACTCTTGACGTTGAGCCTTC 91053 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || |||| || |||||||||||| | || || ||||| Sbjct 91052 CGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCACCTGACCA 90993 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| |||||||| || |||||||| |||||||| ||| ||| ||||||| || || Sbjct 90992 GCAACGTCTAATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTTTGAGCGACTACAA 90933 Query 31372 CATTCA-AAAAGAATCGACTCTTCATCTGGT 31401 ||| || ||| || ||||| ||||| || || Sbjct 90932 CATCCAGAAAGGAGTCGACCCTTCACCTTGT 90902 Score = 141 bits (156), Expect = 8e-29 Identities = 158/210 (75%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| |||||||| ||||| || || || ||||| ||||||| || || || Sbjct 91340 ATGCAGATTTTTGTAAAGACGCTGACGGGAAAGACAATCACTCTCGACGTAGAGCCATCT 91281 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | || || |||| || |||||||||||| | || || |||||| Sbjct 91280 GACTCGATCGATAACGTGAAGCAGAAGATTCAGGACAAGGAAGGAATTCCACCTGACCAG 91221 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC-TCTATGACTATGAGCGATTATAA 31371 || |||||||| || |||||||| |||||||| ||| | | ||| ||||||| || || Sbjct 91220 CAACGTCTAATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGTAACTTTGAGCGACTACAA 91161 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || ||||| ||||| || || Sbjct 91160 CATCCAGAAGGAGTCGACCCTTCACCTTGT 91131 Score = 129 bits (142), Expect = 5e-25 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || |||||| |||| || || || || || | |||||||| | || Sbjct 90655 CATGCAGATTTTTGTCAAGACTTTGACGGGAAAGACTATTACTCTTGACGTTGAGCT-TC 90597 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG--AATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| |||| | | | || |||| ||| |||||||||||| | || || ||| Sbjct 90596 CGACTCGATCGACAAG-TGAAGCAGAAGAAATTTAGGACAAGGAAGGAATTCCACCTGAC 90538 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||| |||||||| || |||||||| |||||||| ||| ||| ||||||| || Sbjct 90537 CAGCAACGTCTAATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTGAGCGACTAC 90478 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || ||||| ||||||||||| || || Sbjct 90477 AACATCCAGAAAGAGTCGACTCTTCACCTTGT 90446 >seq1775 Length=332822 Score = 143 bits (158), Expect = 2e-29 Identities = 177/242 (73%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| ||||| ||||| || || || | ||||| || || Sbjct 274769 AAAATGCAGATTTTCGTCAAGACCCTGACGGGCAAGACCATTACGCTGGACGTGGAGCCC 274828 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || || || | || | |||||||||| ||| |||||||||||| | || |||||| Sbjct 274829 TCGGATAGCATTGACAATGTCAAACAGAAAATTCAGGACAAGGAAGGGATTCCACCCGAC 274888 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || || |||||||| ||| | ||||| |||| || || || Sbjct 274889 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGGACTTTGGCAGACTAC 274948 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425 || ||||| ||||||||||| || || || || | | ||| | |||||| ||||| Sbjct 274949 AATATTCAGAAAGAATCGACGCTGCACCTCGTGTTGCGTCTGCGTGGCGGTGGCAAGAAG 275008 Query 31426 CG 31427 || Sbjct 275009 CG 275010 >seq1342 Length=132421 Score = 125 bits (138), Expect = 6e-24 Identities = 304/457 (67%), Gaps = 14/457 (3%) Strand=Plus/Minus Query 23236 GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAG 23295 |||||| | ||||||| |||||| | ||||| || |||| |||| ||| ||| Sbjct 2347 GCCTTCCTGTTCGTACTGGACGTACAAGGTCTCAAACGCGTCACCCCAACATTCGTACAG 2288 Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACGCGTCT 23352 || |||| || | ||||| | |||||||||| | | |||| ||| ||||| | Sbjct 2287 ACCCGGCGCTTCGTTGGGACAAAAGAGACTCCACGT---GCCATTGGCTTCCACGCGCTT 2231 Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 |||||| ||||| || | ||| | || | |||| || || || || | ||| || Sbjct 2230 CATAAAGAGATCTGGGACCCACAAGGCAAAAAACAAATCCCGAGCACGATGCAACTCGTT 2171 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 |||| ||| || ||| || | ||| || ||||| || || ||||| ||||| || || Sbjct 2170 GCCGTGGTTTTTCCGCAACTCTAGAAATTCAAACACATCAGCGTGCCAGGGCTCTAGATA 2111 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | |||||||| ||| | || ||| || ||||||||||| || ||||||| || Sbjct 2110 GATGGCAAACGAGCCTTTGCGTTTCCCGCCACCTTGATCGACGTACCGCGCCGTGTCATT 2051 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592 | || | | ||| || | || || || |||| ||| | || ||| | | Sbjct 2050 AAAGACGCGCAACATTGGAATGATGCCATTCGACGACCCG--TTCG--TGCCTCGGATGT 1995 Query 23593 ACCTTTT----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648 | || || || |||| |||||| | || || || || ||| || ||||||| | Sbjct 1994 AGCTGTTGGTGGCACGAATGTTGTGCATACTGATCCCGATCCCGCCGGCCCATTTCGAAA 1935 Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 | ||| ||||| || || ||||| || ||||| || Sbjct 1934 TGCACGCACATTGCTTGAGCGTGTCATAAATGCCTTC 1898 >seq312 Length=309945 Score = 123 bits (136), Expect = 2e-23 Identities = 304/455 (67%), Gaps = 11/455 (2%) Strand=Plus/Minus Query 22465 AAACTCGCCGGAC-AAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 ||||||||| | | ||||||||||| | ||| |||||||| || || || || | |||| Sbjct 19106 AAACTCGCCAGCCCAAGACGCGGCGATTGTACATGTTGGACGTAAAGGGCTCAATCGATT 19047 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||||| |||| || ||||||||||| || || ||||| ||||| | || ||||||| Sbjct 19046 CGTTGTTGCCCAAGATTTGAGCGGTCGACGCCGTGGGCATGGGCGCGACCAAGAGCGAGT 18987 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | | || |||| ||| |||| ||| || || ||| ||||| || | || Sbjct 18986 TCCGGAGCCCATGCTGCATGACCTTTT--CCTTCAGTGCCGCCCAATCCCAGAGGCCCGA 18929 Query 22642 CG--GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCT 22699 | |||| || | ||||||| || |||| || | || ||||||| || || Sbjct 18928 TGACGCGTGAC---GCCCCACATGTCAAATTGAAAGATCCCTTGACTCGCGGGCGACCCC 18872 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 | | |||| ||||||||||| | ||||| || | || |||| || || Sbjct 18871 TTGAACGTCTCGTACGGACCCACGGCCATTGCAAGCTCCATGGACGTTTCCATCGACGCG 18812 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGC 22819 ||||| || || || |||||||| ||||| ||| |||| ||| || | | Sbjct 18811 TAATAGATCGTTTCAAAGATTTTTCGATTCAAGTCGCGTGCGGATTGGCTCTCAAATGCA 18752 Query 22820 ATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 | | ||| | | || || || |||| | |||| ||||| || |||| ||| |||| Sbjct 18751 AAATTCATGAGAATAAAAGCATCAGCCA-ATCCTGCACGCCAATGCCGACCGGGCGGTGG 18693 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATA 22914 || ||| ||| || || || |||| ||||| Sbjct 18692 CGCATATTGGACGTTTGGGCTTCTGGCACTGGATA 18658 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 ||| ||||| |||||||| || |||| || |||| || | || |||||||| Sbjct 16738 CTTATCCACGGTAAACTGAATCGCGTCGGCTTTCGGTCGTCCCCGCATGTAGTACATGCC 16797 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 |||||| || || | |||||||||||||| || || ||||| | ||| | ||| ||| Sbjct 16798 CGTCTTGAGCCCTTTTTTCCACGCGTAAAAGTGCATGGACGTGAGTTTGC--TAA-TCGT 16854 Query 22225 CAAGTCC---ATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281 | |||| |||| | || ||||| ||||||||| |||||||| || ||||| || Sbjct 16855 CGGGTCCGCAATGTGAATGTTCAACGATTGACTCTGACAAATAAACGCGCCACGATCCGC 16914 Query 22282 GGCCATAT 22289 || || || Sbjct 16915 GGACAGAT 16922 >seq1422 Length=277306 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| ||||||||| |||| || || ||||| || | ||||| || || || Sbjct 271322 CATGCAAATTTTTGTAAAGACTTTGACTGGTAAGACGATTACGCTGGACGTGGAGCCCTC 271381 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || |||| | || || || | || ||||||||||||| | || || || || Sbjct 271382 GGATTCGATCGACAATGTAAAGCAAAAGATCCAGGACAAGGAAGGCATTCCACCTGATCA 271441 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| ||| | || ||| | ||| || || || || Sbjct 271442 GCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGTACTTTGGCTGACTACAA 271501 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || || || || || ||||||||| Sbjct 271502 TATTCAGAAGGAGTCTACGCTCCACCTGGTACTT 271535 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||||||||| || || |||||||| | ||||| ||||| || Sbjct 271095 ATGCAAATTTTCGTCAAGACTCTGACTGGTAAGACGATCACTTTGGACGTGGAACCTTCG 271154 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | || || || | || |||||||||||| | || || || ||| Sbjct 271155 GACTCGATCGATAACGTAAAGCAAAAGATCCAGGACAAGGAAGGAATTCCACCTGATCAG 271214 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| ||||| || ||||| ||| | || ||| | ||| || || || || Sbjct 271215 CAGCGTCTGATATTTGCCGGCAAGCAGCTCGAGGACGGTCGTACTTTGGCTGACTACAAT 271274 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || | || || || ||||| ||| Sbjct 271275 ATACAGAAGGAGTGTACGCTCCACCTGGTGCTT 271307 >seq1110 Length=486086 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| |||| ||||| || || || | ||||| |||||||| Sbjct 256102 CATGCAGATTTTTGTCAAGACGTTGACGGGCAAGACCATTACGCTGGACGTGGAACCGTC 256161 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || |||| ||| ||||||||||||| | ||||| ||||| Sbjct 256162 AGACAGCATTGACAATGTAAAGCAGAAAATCCAGGACAAGGAAGGCATTCCGCCTGACCA 256221 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||| | || || |||||||| || | ||||| Sbjct 256222 GCAGCGTTTGATCTTTGCTGGCAAGCAACTTGAAGA 256257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445754336446800