Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq1501 87.8 2e-12 >seq1501 Length=377221 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 6509 GCGATAACATGAAGAAGCGGGCCGCCTTGAATACCCGGGAAGATAGCAGAATTTACTTTC 6568 ||||| || || | ||||||||||| || || || |||||||| || || || | ||| Sbjct 169467 GCGATCACGTGCATCAGCGGGCCGCCCTGGATGCCGGGGAAGATCGCCGAGTTGATCTTC 169408 Query 6569 TTGGCGATATCAGCATCGTTAGTAAGAATGAGGCCACCACGAGGGCCGCGCAAAGTTTTA 6628 |||||||| | | ||||| || || |||| ||| || || |||||||||| | || Sbjct 169407 TTGGCGATCGCCTCGTCGTTGGTCAGGATGATGCCGCCGCGCGGGCCGCGCAGGCTCTTG 169348 Query 6629 TGAGTTGTAGTAGTAACAACGTCGGC 6654 || || || | || || |||||||| Sbjct 169347 TGGGTCGTCGACGTCACCACGTCGGC 169322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555348170483400