Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq1177 84.2 2e-11 >seq1177 Length=179586 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 5333 TGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACC 5392 || || || | ||| ||||| |||| |||| || | || | |||||| || || | Sbjct 174240 TGCGCAATGCGGTCCCCCTTTTTAATGACAAAATCAGTTTTGCTGAAGTTGAAAAGGATT 174299 Query 5393 ACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGT 5452 || ||| || || ||||||||||| || | || ||||| || ||||||||||||| Sbjct 174300 ACGGTGACGTTACCACGGTAGTCTTCATCAACTACACCAGCACCGACGTCGATAAAGTTC 174359 Query 5453 TTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACCAGGTGGG 5503 ||| | || || || ||||| || || ||||| | || |||||| ||| Sbjct 174360 TTGGCAGCGAGTCCAGAACGAGGGGCAATGCGAGCATAAGTACCAGGCGGG 174410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447738282754800