Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1526 82.4 7e-11 >seq1526 Length=132622 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/230 (70%), Gaps = 10/230 (4%) Strand=Plus/Plus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCT-CAAGAGATATGTTATTCA 119703 |||||| || || |||||||| || |||||||| || | |||| || || | || Sbjct 118400 GTACTCACCAACCTTCTTTTCAAAGAAGTTAGTCTTTCCTTGCAAG-GAAATCAAGTCCA 118458 Query 119704 TAAACTCGAAAGGATT---TGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACA 119760 | || ||||||||||| | || || | |||| ||| | | || | | ||||| Sbjct 118459 TGAAATCGAAAGGATTGTCTACATTG-TAAAAT--TTGGGGCACTGCAGGGCAACCAACA 118515 Query 119761 GTCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATA 119819 ||||| || ||||| || ||||| | ||||||| || || |||||||||| | || | Sbjct 118516 AGCGATCAGCAACAAATTCAATGTACTGGCACATGAGAGCGC-AATTCATGCCAATCAAA 118574 Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || || || || || | || | ||| |||| |||||| | ||| ||||| Sbjct 118575 GCAACGGGCAAGGCCTCCGTCAGGAATTCCTGTTCAATCTTGACAGCTTC 118624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478649446198800