Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1355 84.2 2e-11 >seq1355 Length=184863 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| || | |||||||| || ||||| | || ||| | | Sbjct 90654 ATGCAGATTTTTGTCAAGACTTTGACGGGAAAGACTATTACTCTTGACGTTGAG-CTTCC 90596 Query 115346 GACACTGTTGGACAAGTAAA--ACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||| | | | ||||||| || | || ||||| || || ||||| | || ||| | Sbjct 90595 GACTC-GATCGACAAGTGAAGCAGAAGAAATTTAGGACAAGGAAGGAATTCCACCTGACC 90537 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | || |||| ||| ||||| || || || || | | || || ||| || | Sbjct 90536 AGCAACGTCTAATTTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTGAGCGACTACA 90477 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||| || |||||||| ||| | || | |||||| | |||| || ||||| Sbjct 90476 ACATCCAGAAAGAGTCGACTCTTCACCTTGTGTTGCGCCTGCGTGGTGGAAA 90425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425332776899800