Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1525 113 4e-20 >seq1525 Length=339361 Score = 113 bits (124), Expect = 4e-20 Identities = 179/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||| ||||||| ||| |||| |||||| || || || ||| |||||||| ||||| Sbjct 147630 GTAAATGTGGGTATCACCCATACAGTGAATGAATTCTCCCGGTTGTAGACCAGTGACATG 147571 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 ||||| ||| || | | ||||| ||||| || ||||| || || || || || Sbjct 147570 AGCAATCATGATCGTCAGTAACGAATAAGAAGCAATATTGAAAGGCACCCCTAAGCCGAT 147511 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACA 20370 || | ||||| |||| | || || | | ||||| |||||||||||||| Sbjct 147510 ATCACAACTTCTCTGGTACATCAAGCACGACAATTTCCCGTCTTGAACATAAAATTGACA 147451 Query 20371 TAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACAT 20430 |||| ||| || || || | ||||||||| ||| || ||||| ||||| || |||| Sbjct 147450 AAACATGTGGCAAGGAGGCAACGCCATCAAATTCAAATCAGCCGGATTCCAAGCGGACAT 147391 Query 20431 AATGATTCTTCTATCGT 20447 ||||||| | ||||| Sbjct 147390 GATGATTCGACGATCGT 147374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441360855348600