Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq1435 84.2 3e-11 >seq1435 Length=478137 Score = 84.2 bits (92), Expect = 3e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 112475 TATGCGGGTGTAGCTCAGTTGGTAGAGCTTCTGATTTCCAATCAGAATGTCGCGTGTTCG 112534 |||||||||||||||||||||||||||| || |||||| || |||||||| ||||| Sbjct 56799 TATGCGGGTGTAGCTCAGTTGGTAGAGCACTTGCCTTCCAAGCAAGATGTCGCGAGTTCG 56740 Query 112535 AGTCACGTTACCCGCTCCAAATTT-GTATGT-AACTCAATTGGTT 112577 | | ||| ||||||||| ||| || ||| || | || ||||| Sbjct 56739 AACCTCGTCGCCCGCTCCAGTTTTGGTCTGTGAATTGAAGTGGTT 56695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752584432632600