Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq1501 163 9e-36 >seq1501 Length=377221 Score = 163 bits (180), Expect = 9e-36 Identities = 236/328 (72%), Gaps = 5/328 (2%) Strand=Plus/Plus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| ||| || |||||||| |||||||||||||||||| | ||||| |||||||||| Sbjct 113734 ACGGGAAGTTGTCGTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTGCCGT 113793 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGG 24939 |||| ||||||||||||||||||||||| || | | ||| | || ||||||| | Sbjct 113794 TCAACATCGCGAGCTACGCGCTGCTGACGCAGATGCTGGCGCAGCAATGCGGACTGGGGC 113853 Query 24940 TCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGG 24999 |||| || ||||||||||| ||||| ||| |||| | || | || ||| ||||||||| Sbjct 113854 TCGGGGACTTCATCTGGACGGGCGGGGACTGCCACATCTACGCAAATCACTTCGAGCAGG 113913 Query 25000 CGACCGA-ACAACTGTCGCGCACGCACACGGGCTATCCGTGGCTGGCGCTGAATCACC-G 25057 | | || || ||| ||||| || | || ||| | ||| | | || | || | Sbjct 113914 TG-CAGACGCAGCTGGCGCGCGAGCCGTATGCGTACCCGACGATGGTGATCAAGCGCCAG 113972 Query 25058 C--GACTCGATCTTCGAGTACACCGCCGACGACGTCATATTCCTCGGCTACCGGCCGCAC 25115 | | ||||||||||| ||| ||| ||| || | | | ||||| || ||| Sbjct 113973 CCGGCGTCGATCTTCGACTACGAGTTCGAGGACTTCGAGCTGCAGGACTACCAGCACCAC 114032 Query 25116 CCGGTCATCAAGGCCCCCGTGGCCGTGT 25143 ||| |||||||| || ||||| |||| Sbjct 114033 GCGGCGATCAAGGCGCCGGTGGCGGTGT 114060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164168579219920