Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq1501 181 3e-41 >seq1501 Length=377221 Score = 181 bits (200), Expect = 3e-41 Identities = 176/226 (78%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 21292 GCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGA 21351 |||||| | |||||| | ||| ||||||| |||||||||||| |||||||| |||| Sbjct 328728 GCTGGCCAAGGAGCTGCGCTGCCCGGTGATCGCGCTGTCGCAGCTGAACCGCTCGGTGGA 328669 Query 21352 GCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCA 21411 ||||||| ||||||| ||||||||||| |||||||||||||| || || |||||||| Sbjct 328668 AACGCGGCCGGACAAGCGTCCGATGATGTCCGACCTGCGCGAGTCGGGCGCCATCGAGCA 328609 Query 21412 GGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCG---GATACCCA 21468 |||||| || | ||||||||| | |||||||||||| |||| | | || | | Sbjct 328608 GGACGCGGACATCATCATGTTCATCTACCGCGACGAGTACTACACCAAGGACGAGTGCAA 328549 Query 21469 GTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514 | | | |||||||| ||| | |||||||| ||||| || |||||| Sbjct 328548 GGAGCCGGGCGTGGCGGAGATCATCATCGCCAAGCAGCGGAACGGC 328503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157106360789810