Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq1501 95.1 4e-15 >seq1501 Length=377221 Score = 95.1 bits (104), Expect = 4e-15 Identities = 121/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 45498 TGAAGCTGTTGGCAAGGGAGATTGGGTGTCCTGTGCTTCCCCTCTGCCAGCTCAACCGAG 45557 ||||| | |||| | |||| | | || || ||| | | || | ||||| ||||| Sbjct 328735 TGAAGGCGCTGGCCAAGGAGCTGCGCTGCCCGGTGATCGCGCTGTCGCAGCTGAACCGCT 328676 Query 45558 -GTTGCGAGTCTCGCCCCGACAAGCGTCCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCC 45616 | || || | || || |||||||||||| | | ||||||||||||||| |||||| Sbjct 328675 CGGTG-GAAACGCGGCCGGACAAGCGTCCGATGATGTCCGACCTGCGCGAGTCGGGCGCC 328617 Query 45617 ATTGAGCAAGACGCCGACATCGTCATGTTCGTGTACCGCGATGA 45660 || ||||| ||||| |||||| |||||||| | |||||||| || Sbjct 328616 ATCGAGCAGGACGCGGACATCATCATGTTCATCTACCGCGACGA 328573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172750758571780