Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq2115 107 1e-18 >seq2115 Length=4915 Score = 107 bits (118), Expect = 1e-18 Identities = 188/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 79549 ACGACCAACAATCGGATGGAGATGATGGGCGCCCTGATTGCGCTGGAGCGTCTGAAGTAC 79608 ||||||||||| || ||||| |||||| ||| | |||||||||| ||||| | Sbjct 4439 ACGACCAACAACCGCATGGAACTGATGGCCGCGATCCAGGCGCTGGAGCTGCTGAACCGC 4380 Query 79609 CCCTGCAACGTGATCCTGCATTCCGACAGCCAGTATCTAAAAAACGGCATGACGCTCTGG 79668 |||||||| || ||||| | ||||||||||| | | || || || | ||| Sbjct 4379 CCCTGCAAGGTCGAGCTGCACACGGACAGCCAGTACGTCATGAAGGGGATTCAGGAGTGG 4320 Query 79669 ATGAAAGGCTGGAAGCGTAACGGATGGATCACGTCTGAGAAGAAGCCAGTCAAAAACGTC 79728 || ||||||||| ||| |||| || | || |||| || ||||| |||| | Sbjct 4319 ATCCGGGGCTGGAAGGCGCGCGGCTGGAAGACCGCCGACAAGAGCCCTGTCAAGAACGAC 4260 Query 79729 GATCTCTGGAAACGTCTTGATGCGGC-CGCCAGCCGTCACAATGTCCGCTGGAAGTGGGT 79787 || |||||||| ||||| || || || ||| || || ||| | ||| |||| ||||| Sbjct 4259 GACCTCTGGAAGCGTCTCGACGCCGCGCGCGAG-CGGCACGACGTCGACTGGCGCTGGGT 4201 Query 79788 TAAAGGTCATGCCGGTCATCGCGAGAACGAA 79818 || || || ||||| |||| ||||||| Sbjct 4200 CAAGGGGCACGCCGGCCATCCGCTGAACGAA 4170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330423281241900