Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1166 201 7e-46 seq100 120 2e-21 seq763 114 8e-20 seq1775 111 1e-18 seq1630 105 4e-17 seq1422 105 4e-17 seq1543 96.9 2e-14 seq1890 91.5 1e-12 seq1355 91.5 1e-12 >seq1166 Length=243427 Score = 201 bits (222), Expect = 7e-46 Identities = 558/842 (66%), Gaps = 14/842 (2%) Strand=Plus/Plus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 |||| ||| ||||| || | || || ||||| ||| | || | |||||||||||| Sbjct 176216 GAAGGAGGTGTTTTCGAAGTCAAGGCTACTGCTGGTGATACTCACTTGGGTGGTGAAGAT 176275 Query 475400 TTTGATAATAGACTTGTATCATGG-TGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGA 475458 || ||||| | |||| | | | ||||||||| |||||| | || || || || Sbjct 176276 TTCGATAACCG-CTTGGTTAACCACTTTGTTGAAGAATTCAAGCGCAAGAACAAGAAGGA 176334 Query 475459 TCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCG 475518 || | | |||| || | | |||||| | |||||||| ||||| |||||||| Sbjct 176335 CATTACCAGCAATGCTCGTGCTCTTCGTCGTCTTCGCACTGCTTGCGAACGCGCTAAGCG 176394 Query 475519 AGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGA 475578 | | ||||||||||||||| || | |||||| | ||||| | || || || || || Sbjct 176395 TACCTTGTCTTCTGCTACTCAAGCTTCCGTTGAAATCGATTCCTTGTTCGATGGTATGGA 176454 Query 475579 TTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAA 475638 | | | ||| ||| | | ||| |||||||| |||| || | || | Sbjct 176455 CTTTTACACTTCCATTTCTCGTGCTCGCTTTGAAGAACTTTGCATGGACTTGTTCCGTGC 176514 Query 475639 AACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCC 475697 || ||||| ||||||||| | || | | ||||| || |||| || | || | || Sbjct 176515 CACCATTGACCCCGTTGAAAAGGTCTTGCGTGATTCCAAGATTGATAAGAGCA-AGGTTG 176573 Query 475698 ATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCAT 475757 | |||||||| | || || ||||| || | ||||| || | | | || || | Sbjct 176574 ACGAAATTGTCTTGGTCGGTGGTTCCACTCGTATTCCCAAGGTTCAAAAGTTGATTACTG 176633 Query 475758 CATATTTTAATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATA 475815 | || || || ||| | || |||| || || |||||||| |||||||| || Sbjct 176634 ACTTCTTCAACGG--AAAGGAACCCTGCAAGTCTATCAACCCTGATGAGGCTGTTGCTTA 176691 Query 475816 TGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCA-ATCAGACGAGAA-ACTAAATAAT 475873 || ||||| || ||||| || || | || ||| | ||| | |||| ||| || | | Sbjct 176692 CGGTGCTGCCGTTCAAGCTGCCATCCTTTCTGGTGTCAGCAG-CAAGAAGACTGAAGATT 176750 Query 475874 A-TTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTAT 475932 ||| |||| ||||| |||| | || || ||| ||||||| | ||| || | || Sbjct 176751 TGTTGCTCTTG--GACGTTGCTCCCTTGTCTTTGGGTATTGAAACTGCTGGTGGTGTCAT 176808 Query 475933 GACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCAC 475992 |||| | | ||| | | |||||| | || || || || || | || || || Sbjct 176809 GACTGCTTTGATTCCCCGTAATACTACCATTCCCACTAAGCGTTCTCAAATCTTCTCTAC 176868 Query 475993 TTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCAC 476052 ||| ||||||| ||| | ||| || ||| | |||||||||||| | | || || Sbjct 176869 TTACGCTGATAACCAACCTGGTGTCTTGATTCAAGTTTTTGAAGGTGAACGTACTTTGAC 176928 Query 476053 TAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGG 476112 || ||||| ||| || || | || | ||| || ||||| || ||||| | || Sbjct 176929 CAAGGATAACAACTTGCTCGGTAAATTCGAGCTTTCTGGAATTCCCCCGGCTCCTCGCGG 176988 Query 476113 AGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 ||||||||||||||||| ||||| || |||||| |||||||||| | || ||| | || Sbjct 176989 TGTTCCTCAAATTGAAGTCACTTTCGACGTTGATGAAAATGGTATTTTGAAGGTTTCCGC 177048 Query 476173 TT 476174 || Sbjct 177049 TT 177050 Score = 172 bits (190), Expect = 4e-37 Identities = 404/601 (67%), Gaps = 23/601 (4%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 ||||||||||||| || ||||||||| ||| || | | ||| |||| | || | Sbjct 175599 TTGGTATTGATTTGGGTACTACTTACTCTTGCGTTGGTTACTGGACTAATGATCGTGTTG 175658 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| ||||| || ||||||||||| | || || || || ||||| | || ||||||| Sbjct 175659 AAATCATTGCTAACGACCAAGGTAACCGCACTACTCCCTCTTATGTCGCCTTCACTGAAA 175718 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 |||| | | ||||| ||||||||||| | |||| || || || | || ||| Sbjct 175719 CTGAGCGCTTAATTGGTGATGCTGCTAAGAACCAAGTCGCCATGAACCCCTTCAACACTG 175778 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || |||||||| | |||||||||||| ||| || | |||||| || | Sbjct 175779 TCTTCGATGCTAAGCGTTTGATTGGTCGTCGTTTCACCGACAAGGAAGTCCAAGACGACA 175838 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATAGAAGCAAT 474630 || || ||||| || ||||| || | | || || || | | ||| Sbjct 175839 TGAAGCACTGGCCCTTCAAGGTCATTGACCAAGACACCAAGCCCGTCATTCAAATTGAAT 175898 Query 474631 ACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGGTTTTAGCC 474688 || | |||| | ||| | | |||| || ||| |||| ||||| ||||| || Sbjct 175899 TCAAG--GGTG--AGCAAAAAGTGTTCACTCCTGAAGAAATCTCTTCCATGGTCTTGTTG 175954 Query 474689 AAAATGAAACAAACCGC--GAGCTCATATCTTGGAC-AAGAAGTAACTGATGCAGTAATT 474745 || ||||| ||||| || ||| | ||||| || ||||||| | |||| || | Sbjct 175955 AAGATGAAGCAAACTGCTGAAGC---TTTCTTGAACGAAGAAGTCAAGAATGCCGTCGTC 176011 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || || || ||||| |||||||||||||| || || ||||| ||| ||| Sbjct 176012 ACCGTCCCTGCCTACTTCAATGACTCTCAACGTCAAGCTACCAAGGATGCTGGAGCCATT 176071 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | || ||| | || || ||||| ||||| || || || || ||||||| || Sbjct 176072 GCCGGTTTGAACGTTCTCCGCATCATTAACGAACCCACTGCTGCTGCCATTGCTTACGGA 176131 Query 474866 CTTGATAAGA---ATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGT 474919 | ||||||| | ||||| ||| ||||| | ||||| |||| |||| ||| Sbjct 176132 TTGGATAAGAGCTGTACTGAC---GAACGCAATGTCCTCATCTTCGATTTGGGTGGTGGT 176188 Query 474920 A 474920 | Sbjct 176189 A 176189 >seq100 Length=112360 Score = 120 bits (132), Expect = 2e-21 Identities = 274/413 (66%), Gaps = 16/413 (4%) Strand=Plus/Minus Query 475775 AAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCA 475834 || |||||| |||| |||||||| ||||||| |||||| | ||||| ||||| ||||| Sbjct 5515 AACTTAAATCAAAGCGTAAATCCGGATGAAGTTGTTGCTTTAGGAGCAGCTGTTCAAGCT 5456 Query 475835 GCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAAT--ATTGTACTTGTTGACGTAA 475892 | || | ||||| ||||| ||| | | ||| |||| | || ||| Sbjct 5455 GGAGTTGTTTCAGG-----------AGAAATAAAAGATTTAATTTTACTAGATG---TAA 5410 Query 475893 CTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAA 475952 | ||| | || | || | |||||| | |||||||| ||||| || | ||| |||| Sbjct 5409 CACCATTATCTCTTGGAGTGGAAACATTAGGAGGGATAATGACAAAAGTAATTCCAAGAA 5350 Query 475953 ATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAA 476012 || | | || ||| | || | || || | ||||| || | |||| |||| Sbjct 5349 ATTCATCGATTCCAGTAAGAAGAACAGAAATTTTTTCAACGGGTGCTGACTTTCAAGATG 5290 Query 476013 CTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTG 476072 ||| || || | || |||| |||||| | || |||| ||||||| | | | Sbjct 5289 TTGTGGAAATTCACGTATTACAAGGGGAAAGAGATTTTGTTAAATATAATAAAAGTTTAG 5230 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 ||| ||||| ||| || ||||| |||| | ||| ||||| |||||| | || | Sbjct 5229 GAATCTTTAAGCTTAGTGGCATTCCAAAAGCTCGTAAAGGGGTTCCACAAATTAATGTAA 5170 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCT 476185 ||||||||||||| || |||| | ||| || |||||||||| ||||| Sbjct 5169 CTTTTGATATTGACACAGATGGCTTACTTTCAGTATCTGCTTGTGAAGAATCT 5117 Score = 120 bits (132), Expect = 2e-21 Identities = 274/413 (66%), Gaps = 16/413 (4%) Strand=Plus/Plus Query 475775 AAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCA 475834 || |||||| |||| |||||||| ||||||| |||||| | ||||| ||||| ||||| Sbjct 13665 AACTTAAATCAAAGCGTAAATCCGGATGAAGTTGTTGCTTTAGGAGCAGCTGTTCAAGCT 13724 Query 475835 GCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAAT--ATTGTACTTGTTGACGTAA 475892 | || | ||||| ||||| ||| | | ||| |||| | || ||| Sbjct 13725 GGAGTTGTTTCAGG-----------AGAAATAAAAGATTTAATTTTACTAGATG---TAA 13770 Query 475893 CTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAA 475952 | ||| | || | || | |||||| | |||||||| ||||| || | ||| |||| Sbjct 13771 CACCATTATCTCTTGGAGTGGAAACATTAGGAGGGATAATGACAAAAGTAATTCCAAGAA 13830 Query 475953 ATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAA 476012 || | | || ||| | || | || || | ||||| || | |||| |||| Sbjct 13831 ATTCATCGATTCCAGTAAGAAGAACAGAAATTTTTTCAACGGGTGCTGACTTTCAAGATG 13890 Query 476013 CTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTG 476072 ||| || || | || |||| |||||| | || |||| ||||||| | | | Sbjct 13891 TTGTGGAAATTCACGTATTACAAGGGGAAAGAGATTTTGTTAAATATAATAAAAGTTTAG 13950 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 ||| ||||| ||| || ||||| |||| | ||| ||||| |||||| | || | Sbjct 13951 GAATCTTTAAGCTTAGTGGCATTCCAAAAGCTCGTAAAGGGGTTCCACAAATTAATGTAA 14010 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCT 476185 ||||||||||||| || |||| | ||| || |||||||||| ||||| Sbjct 14011 CTTTTGATATTGACACAGATGGCTTACTTTCAGTATCTGCTTGTGAAGAATCT 14063 Score = 113 bits (124), Expect = 3e-19 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 || || || |||||||| ||||||||||| ||| | | ||||| ||||||| |||||| Sbjct 6160 ATAACAGTACCAGCATACTTTAATGATTCGCAAAGACTCGCAACCCAAGATGCTGGAAGA 6101 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 |||||||||||| | ||| |||| ||| | |||||||| || ||||| || | |||||| Sbjct 6100 ATTGCAGGTCTTGAAGTTCTACGAATTTTAAATGAACCTACCGCAGCGGCCTTAGCTTAT 6041 Query 474863 GG 474864 || Sbjct 6040 GG 6039 Score = 113 bits (124), Expect = 3e-19 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 || || || |||||||| ||||||||||| ||| | | ||||| ||||||| |||||| Sbjct 13020 ATAACAGTACCAGCATACTTTAATGATTCGCAAAGACTCGCAACCCAAGATGCTGGAAGA 13079 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 |||||||||||| | ||| |||| ||| | |||||||| || ||||| || | |||||| Sbjct 13080 ATTGCAGGTCTTGAAGTTCTACGAATTTTAAATGAACCTACCGCAGCGGCCTTAGCTTAT 13139 Query 474863 GG 474864 || Sbjct 13140 GG 13141 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887 ||||| | ||| | ||||| || |||||||||| ||||| || || |||||||||||| Sbjct 6039 CCATAAGCTAAGGCCGCTGCGGTAGGTTCATTTAAAATTCGTAGAACTTCAAGACCTGCA 6098 Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947 ||| || | | |||| ||||| | | ||||| ||||||||| || || || ||||| Sbjct 6099 ATTCTTCCAGCATCTTGGGTTGCGAGTCTTTGCGAATCATTAAAGTATGCTGGTACTGTT 6158 Query 290948 ATAACAGCTTT 290958 |||| ||||| Sbjct 6159 ATAATCGCTTT 6169 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887 ||||| | ||| | ||||| || |||||||||| ||||| || || |||||||||||| Sbjct 13141 CCATAAGCTAAGGCCGCTGCGGTAGGTTCATTTAAAATTCGTAGAACTTCAAGACCTGCA 13082 Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947 ||| || | | |||| ||||| | | ||||| ||||||||| || || || ||||| Sbjct 13081 ATTCTTCCAGCATCTTGGGTTGCGAGTCTTTGCGAATCATTAAAGTATGCTGGTACTGTT 13022 Query 290948 ATAACAGCTTT 290958 |||| ||||| Sbjct 13021 ATAATCGCTTT 13011 >seq763 Length=1375 Score = 114 bits (126), Expect = 8e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 474723 AAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAG 474782 ||||||| ||||| || || |||||||| ||||| || ||||| || |||||||||| Sbjct 76 AAGAAGTCACTGAAGCCGTCATTACTGTACCAGCTTACTTTAACGACAGCCAACGTCAAG 135 Query 474783 CAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAA 474842 | ||||||||||| || | || || ||| | | || |||||| ||||| ||||||| Sbjct 136 CCACTAAAGATGCAGGCCGTATCGCTGGTTTAGAAGTGAAACGTATCATTAACGAACCAA 195 Query 474843 CAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 | || || || ||||||| |||| | ||||| Sbjct 196 CCGCTGCTGCGCTTGCTTTTGGTATGGATAA 226 Score = 100 bits (110), Expect = 2e-15 Identities = 255/381 (67%), Gaps = 8/381 (2%) Strand=Plus/Plus Query 475881 TTGTT-GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAAT 475939 ||||| |||||||| ||| | ||||||||| |||| || | || || | |||||||| Sbjct 852 TTGTTAGACGTAACACCATTGTCATTAGGTATTGAGACCTTGGGTGGTGTGATGACTAAA 911 Query 475940 CTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCT 475999 || || | | ||| || | |||||| |||| |||| |||| || || ||| | Sbjct 912 CTCATCAAGAAAAACACAACGATCCCAACCAAAGCATCACAAGTGTTCTCAACTGCTGAA 971 Query 476000 GATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGAT 476059 || || || | | || || || ||| | || ||||||| | || | || | Sbjct 972 GACAACCAGAATGCAGTGACTATTCAAGTGTTGCAAGGTGAGCGTGAAATGGCTTCTGGC 1031 Query 476060 AATAACAAACTTGGAACTTTTAATCTTGAAGG-TATTCCTCCTGCTCCCAGAGGAGTTCC 476118 ||||| | | || ||||| ||||| | |||||| || || || | || | || Sbjct 1032 AATAAGAGCTTAGGTCAATTTAA-CTTGAGCGATATTCCACCAGCACCACGTGGCATGCC 1090 Query 476119 TCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGA 476178 ||||||||||| || |||||||| ||||| || |||||| | ||||| | || || Sbjct 1091 ACAAATTGAAGTGACGTTTGATATCGATGCTAACGGTATTTTGCATGTTTCAGCAAAAGA 1150 Query 476179 TAAATCTAGTAACAAGAGTAAA-AATATAACTATTACAAACAATCGTGGTAGATTTACTG 476237 ||| | | | ||| || ||| || || || |||| | ||| | ||| || | || Sbjct 1151 CAAAGCAACTGGCAA-AGAAAACAAAATCACGATTAAAGCCAACAGCGGT---TTAAGTG 1206 Query 476238 AAGAACAAATTCAACGTATGG 476258 ||||| |||| |||| |||| Sbjct 1207 AAGAAGAAATCAAACGCATGG 1227 >seq1775 Length=332822 Score = 111 bits (122), Expect = 1e-18 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | || || || || || |||||| || ||| || || || | ||| Sbjct 274993 ACGCAGACGCAACACGAGGTGCAGCGTCGATTCTTTCTGAATATTGTAGTCTGCCAAAGT 274934 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||| || ||||| |||||||| || ||||| || || || || ||||| || Sbjct 274933 CCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGTGGAATCCC 274874 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| ||||| || ||||||||| ||||| |||| | | | || || Sbjct 274873 TTCCTTGTCCTGAATTTTCTGTTTGACATTGTCAATGCTATCCGAGGGCTCCACGTCCAG 274814 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || ||||| |||||||| || Sbjct 274813 CGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTG 274775 >seq1630 Length=98064 Score = 105 bits (116), Expect = 4e-17 Identities = 174/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 297136 TATTGGGGAACACCAATTCCAATTTGGAAATCTGATGATGGTGAAGAAATAATTTGTATT 297195 |||||||| || |||||||| ||||| ||| ||| | ||||| ||||| ||| Sbjct 34931 TATTGGGGTACTCCAATTCCTCTTTGGGCTAATGAAGATTTTTCCGAAATTATTTGCATT 34990 Query 297196 GGTTCACTTGAAGAATTAAAAGAATTTTCAGGAATTGATAATATTAATGATTTACATATT 297255 || ||| |||| ||| | || || | || || |||||| || || ||| | Sbjct 34991 GGATCAATTGAGGAACTTGAACGCTTGACCGGTGTTTCAGGTATTAAAGACTTGCATCGT 35050 Query 297256 GATAAAATTGATCAAATAAAAATTCCTTCTCGTAAAGGAAAAGGCATGTTATCTCGTGTT 297315 || | |||||||| | | |||||||| ||| | ||||| ||| | || ||||||| Sbjct 35051 GAAAGCATTGATCATTTGACTATTCCTTCACGTGATGGAAAGGGCGTTTTGCGTCGTGTT 35110 Query 297316 ACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTAT 297375 | ||| | ||||||||||||||| || | | ||||||| ||| |||||||| Sbjct 35111 GAAGAAGTTCTGGATTGTTGGTTTGAAAGTGGAAGTGTCCCTTATGCTCAGCTTCATTAT 35170 Query 297376 CCTTTTGAAAA 297386 || |||||||| Sbjct 35171 CCATTTGAAAA 35181 >seq1422 Length=277306 Score = 105 bits (116), Expect = 4e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 ||| ||||| || || || ||| || || || ||| || ||||| | ||| | Sbjct 271538 ACGAAGTACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGACC 271479 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 || || || ||||| |||||||| || ||||| || |||||||| ||||| |||||||| Sbjct 271478 GTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGTGGAATGCCTTCCTT 271419 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || |||||||| || ||| || || | ||| | | | || || ||||| Sbjct 271418 GTCCTGGATCTTTTGCTTTACATTGTCGATCGAATCCGAGGGCTCCACGTCCAGCGTAAT 271359 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || | |||||| || |||||||| Sbjct 271358 CGTCTTACCAGTCAAAGTCTTTACAAAAATTTG 271326 Score = 95.1 bits (104), Expect = 8e-14 Identities = 155/219 (71%), Gaps = 12/219 (5%) Strand=Plus/Minus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 ||| || || || || || |||| || || | ||| || ||||| | ||| | Sbjct 271310 ACGAAGCACCAGGTGGAGCGTACACTCCTTCTGTATATTGTAGTCAGCCAAAGTACGACC 271251 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 || || || ||||| || ||||| || ||||| || |||||||| |||||||||||||| Sbjct 271250 GTCCTCGAGCTGCTTGCCGGCAAATATCAGACGCTGCTGATCAGGTGGAATTCCTTCCTT 271191 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG----- 480731 ||| || |||||||| || || | | || | ||| | || |||| ||| | | Sbjct 271190 GTCCTGGATCTTTTGCTTTAC-GTT---ATCG-ATC-GAGTCCGAAGGTTCCACGTCCAA 271137 Query 480732 -GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| || |||||||| ||||||||||| Sbjct 271136 AGTGATCGTCTTACCAGTCAGAGTCTTGACGAAAATTTG 271098 >seq1543 Length=144401 Score = 96.9 bits (106), Expect = 2e-14 Identities = 250/376 (66%), Gaps = 4/376 (1%) Strand=Plus/Plus Query 269131 GGTCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATAT 269190 || ||||| || | || ||| | ||||| | ||||| ||||||||||| |||||||| Sbjct 15580 GGCCCACGTGCACGAGCATGAATCTTATCATCGACCATGTGTTTTAAACGTTGATAATAC 15639 Query 269191 GTCGGACCAATAAATATTTTGACATGCATTTTTTC-TCCCGTCATACCATTTGTCATTGT 269249 || || |||| || |||| || ||| ||| | ||| || |||||| ||| Sbjct 15640 GTTGGTCCAAGGAAGATTT-GAGCTGCCAATTTGCGTCCAGTGTGACCATTGTACATGAC 15698 Query 269250 TTCATTTCCCCATGCTTCATATCCGTATGAAACTAGTTCATCATTTATTTTATTAATATC 269309 ||| ||| | | | |||||| | | | | | | | | ||| | || Sbjct 15699 TTCCAATCCTCGTTGCTGATATCCACAAGCAGCCAAAGCCTGAGAAATTGCTTCAACTGT 15758 Query 269310 TACACCTGTAAATGGTGTCGCATCACCAT-ATACTCCTTTAATAGCACATACTTTTCCTA 269368 || | ||||| ||||| |||||||| | || | | |||| ||||| ||||| || | Sbjct 15759 GACGTCAGTAAAGGGTGTAGCATCACCTTCATCCCCAGTTAA-AGCACTCACTTTACCCA 15817 Query 269369 ATAGACATTCAATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAA 269428 ||| |||||||| || || ||||| ||||||||| || || || ||||||||| | Sbjct 15818 ATAAACATTCAACTAAATGACCAATTGTCATACGTGAAGGAATTGCATGAGGATTAATGA 15877 Query 269429 TAATATCTGGCACAAGTCCAGATTTAGTAAATGGCATATCTGCTCTATGAATTTTAAATC 269488 |||| || || | || || |||||||||||| | ||| || | | || Sbjct 15878 TAATGTCCGGGGTTAAACCTTCCGCGGTGAATGGCATATCTTCACTACGATAAGTTATTC 15937 Query 269489 CAACTGTACCTTTTTG 269504 ||||||| |||||||| Sbjct 15938 CAACTGTTCCTTTTTG 15953 >seq1890 Length=541308 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || || ||||| || || || ||||| ||||||||||||||||| || || ||||| Sbjct 523764 GCCGTCATCACTGTCCCTGCTTACTTTAACGATTCTCAACGTCAAGCGACCAAGGATGCT 523705 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 || | |||||| || | | || | ||| | ||||||||||| || || || || | Sbjct 523704 GGTACAATTGCCGGCTTGGAAGTCCTTCGTGTCATTAATGAACCCACGGCTGCAGCTTTG 523645 Query 474857 GCTTATGGTCTTGATAAG 474874 |||| |||| | |||||| Sbjct 523644 GCTTTTGGTTTGGATAAG 523627 >seq1355 Length=184863 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||| |||||| Sbjct 90737 TGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCCTGAATC 90796 Query 480687 TTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCG 480746 || || || || || || | || | | | ||||| || || || || || Sbjct 90797 TTCTGCTTCACGTTGTCGATCGAGTCGGAAGGCTCAACGTCAAGAGTGATTGTCTTTCCC 90856 Query 480747 GTGAGAGTCTTAACGAAAATTTG 480769 || | |||||| |||||||| || Sbjct 90857 GTCAAAGTCTTGACGAAAATCTG 90879 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||| |||||| Sbjct 90966 TGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCCTGAATC 91025 Query 480687 TTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCG 480746 || || || || || || | || | | | ||||| || || || || || Sbjct 91026 TTCTGCTTCACGTTGTCGATCGAGTCGGAAGGCTCAACGTCAAGAGTGATTGTCTTTCCC 91085 Query 480747 GTGAGAGTCTTAACGAAAATTTG 480769 || | |||||| |||||||| || Sbjct 91086 GTCAAAGTCTTGACGAAAATCTG 91108 Score = 89.7 bits (98), Expect = 3e-12 Identities = 111/150 (74%), Gaps = 14/150 (9%) Strand=Plus/Plus Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||| | ||| Sbjct 90509 TGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCCTAAATT 90568 Query 480687 TTTTGTTTGACAGCTTCAATAGT--ATCAGTGTGTGAAGTT-----TCAAGGGTAATAGT 480739 | || | |||||| | || ||| | || |||| | ||||| |||||||| Sbjct 90569 TCTT------CTGCTTCACTTGTCGATC-GAGTCGGAAGCTCAACGTCAAGAGTAATAGT 90621 Query 480740 TTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || | |||||| || ||||| || Sbjct 90622 CTTTCCCGTCAAAGTCTTGACAAAAATCTG 90651 Score = 87.8 bits (96), Expect = 1e-11 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||| |||||| Sbjct 91195 TGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCCTGAATC 91254 Query 480687 TTTTGTTTGAC 480697 || || || || Sbjct 91255 TTCTGCTTCAC 91265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268086332645420