Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_020862.2 Length=74485 Score E Sequences producing significant alignments: (Bits) Value seq1435 93.3 2e-14 >seq1435 Length=478137 Score = 93.3 bits (102), Expect = 2e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 41089 TTCACAGAACCCAAGAGACATGCACCATATGGAGGCAATGGTTGTTCACCACATGGGTTT 41148 || || |||||||| | ||| || ||||| || |||| |||||| ||||||||||| || Sbjct 346870 TTGACTGAACCCAATAAACAAGCGCCATAGGGCGGCAGTGGTTGCTCACCACATGGATTG 346929 Query 41149 GTTGCTGCAATTGTCTCACAGAACCAAAGGTTATTCTCTTTGTTGATACGATCAATAAAG 41208 ||||| || | || |||||||| || ||| || || | |||||||| ||| Sbjct 346930 GTTGCGCGGATATTTTCGCAGAACCAGTTATTGTTCATTTCATTCACGCGATCAATCAAG 346989 Query 41209 ATAACTCCGGGTTCAGCAAAGTCATAGGT 41237 |||| || || |||||||| || ||||| Sbjct 346990 ATAAAACCTGGCTCAGCAAAATCGTAGGT 347018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238220914151990